Sinocyclocheilus rhinocerous: 107710344
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Entry
107710344 CDS
T04916
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107710344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107710344
03036 Chromosome and associated proteins [BR:
srx03036
]
107710344
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107710344
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107710344
PBAF complex
107710344
GBAF(ncBAF) complex
107710344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
107710344
NCBI-ProteinID:
XP_016370582
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MATTQALGSAAAGPTTSQAGCSSSLSRRMDGGPCCKFWESPEIISQLETVRSWIGKHYKK
YVQTDAPSRKSLSGLVIQLLQFQEDSFGRRANNPSFTKLPAKCFQDLRPGGALCHILGSV
YKFKTEQGWRRFDLQNPSRVDRNVEMFISVEKTLIQNNLLSRPVVYLSPDLEQKQALKLK
DIVVRHQGTVTEEKSQATHQIYTSPSTADEEEWLRPVMRLDRQVMVHWGMCPDSYDSLIL
ASDVDGEVEEPPNPDRCWKVHTKWVLDTDTYNEWMNEEDYEIDENGNRMSSRRRIYQSTE
EQKPEKKRRRSPSPPSSESKKKGGKKSSGVYKRRGQPEEAESEEDLTKDMEDPTPVPNME
EVILPKILNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEQREFGRGMEGEESATEQ
THHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTSCRRNLTGDVCALIRVHSFLEQWGFINYQVDAESRPLPMGPPPTPHFNVLTDTPSG
LVPLQHRPLQVSASQHMLHFPEKLREKPSDLQNFGLRTDIYAKKHPKSKGASAGREWTEQ
ETLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPV
PFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSRAREEAPPEIFNASFHKAQSVGH
NLDPAFTLQTGSIAELDPDHSEKTDGSSIETMSTAYEQHEKLEGDSILGEGEHVKNEEKE
ESEGERGEESTAEESFDMCLTQGDGEEMKRRMALELVEGNIATAAAAALASAATKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHVE
QVKYAEMKARQNVEQQQQAGATQSSSSTAYNPLHHGCSVGSASTGQIVGARHSGAPNGMC
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctactacacaagcgctaggatctgccgctgcgggacctacgacgagtcaagccggt
tgcagctcttcgttgagccgaagaatggacggtggaccatgctgtaaattctgggaaagc
ccggaaataatctctcagttggaaacggttcgcagttggattggaaaacattataaaaag
tatgtacagactgatgctccctccagaaagtctctgtctgggctggtcatccaactgctg
cagtttcaggaagattcatttggccggcgagcaaataacccaagctttacaaaactccca
gcaaagtgttttcaggacctaaggccaggcggtgctctctgtcatattctgggatcagtg
tacaagttcaagacagaacagggctggagacgctttgatcttcagaacccatccagagtg
gatcgcaatgtggagatgttcatctctgtggagaaaactctgatacagaataacttatta
agcagacctgtggtgtacctgtctcctgatcttgaacagaagcaagctcttaaactcaaa
gacattgttgtgcgacaccagggcacagtgacagaggagaagtcacaagccacccaccaa
atatatacatcaccctccacagcagatgaagaagagtggcttagaccagtcatgcgattg
gatcggcaagtgatggtacattggggcatgtgtccagacagttatgactcgcttatattg
gcaagtgatgtagatggagaagtagaggaacctcccaacccagacaggtgctggaaggtt
cataccaaatgggttctcgacacagacacatataatgagtggatgaatgaggaagactat
gagattgatgagaatgggaatagaatgagttccaggcggcgtatctaccaaagcacagag
gaacagaaacctgaaaagaagcgacgacgctccccgtctccaccgtcctctgagtctaag
aagaaaggaggaaagaaaagctcaggtgtgtataagaggcgtggtcaaccagaggaggcg
gagtcagaggaggacctcactaaagacatggaggatcccacacctgtccctaatatggag
gaggtcattctgcctaaaattttgaacttgaaaaaagacagtgaaaacactccagtcaaa
ggaggcattatggctgatttagatgaccaggaagaggacctgctttctggtgtcagagat
gaggaggagcagagggagttcggccgtgggatggagggggaggagagtgccacagagcaa
acacatcacatcattgtgcccacctatgcctcctggtttgactacaactgtattcatcag
atagagagacgagctctgcccgagttcttcaatgggaaaaataagtccaaaacaccagaa
atatatcttgcataccgcaacttcatgattgatacataccggctaaaccctcaggagtat
ctgacctcaacctcctgtagacgaaacctgacaggagatgtgtgtgcactaataagggtt
cattcatttttggagcagtgggggtttatcaactatcaggtagatgcagaaagccgaccc
ctccccatgggcccacccccaacaccacactttaacgttctcacagacacaccgtccgga
cttgtcccactacagcacagacccttacaggtttcagcttctcagcatatgttgcatttc
ccagagaaattgagagaaaaaccatctgacctgcagaactttggtctacggactgatatt
tatgctaagaaacatccaaagagtaaaggcgcaagtgcagggagagaatggacagaacag
gaaacactcttgcttttggaggcattggagatgtataaggatgactggaataaggtgtcc
gagcatgtgggcagtcgcacacaggatgactgtattcttcacttcttacggttgcccata
gaggacccatacctagagaactctgaagcctcaatgggtcctctggcctatcagcctgtc
cccttcagccagtcagggaaccctgtaatgagcactgttgctttccttgcatctgtggtc
gaccctcgagtggcctctgcagccgccagggcagctttagaggaattctcaagagcaaga
gaagaggccccaccagagatattcaatgccagctttcacaaagcacagagcgttgggcat
aatttagatccggcttttacactccaaacaggcagcattgcagaacttgatcctgaccat
tcagaaaagactgatgggagtagtatagaaacgatgagcactgcatatgagcaacatgaa
aagcttgagggtgatagcatcttgggagagggagagcatgtgaagaatgaggagaaagaa
gagagtgaaggagagaggggagaggagagcacagcagaggaaagttttgacatgtgcctt
acccaaggggatggagaggagatgaagaggaggatggcgcttgagctggtggagggaaac
atcgccacagctgctgctgcagcactggcctctgcagctaccaaagcaaagcacttggct
gcagtagaagagaggaaaatcaaatctctggtggctctgctggttgaaactcagatgaaa
aagttggagatcaaactgagacactttgaagagctggagaccattatggatcgagaaaaa
gaggctctggagcagcagagacagcagttattgtcggagaggcagaacttccatgtggag
caggtgaaatatgctgagatgaaggcacgacagaatgtggaacagcagcaacaagcggga
gccacacagagcagcagtagtacagcatacaaccctcttcaccatggatgttcggtgggc
agtgctagtactggacagattgtgggcgctcggcactctggagctcccaatggcatgtgt
gagtaa
DBGET
integrated database retrieval system
