Sinocyclocheilus rhinocerous: 107710892
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Entry
107710892 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107710892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107710892
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107710892
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
HECT type E3
107710892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
107710892
NCBI-ProteinID:
XP_016371246
UniProt:
A0A673LXR1
LinkDB
All DBs
Position
Unknown
AA seq
2094 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSPPESRRSNSKASKAP
PSSAVGSARGHASRRNSLSLSVSSHSIPDPDLEAAGTSGQQGRREGSSTRALKRSSALEP
NITFSPSPPKRPKAVSSHLLESSSSGPSAPATSPEVTEPRKAPASVSTKSKKRRLAAEPA
PAKALSKKSTSYLGPSGASITPSQKRKKAGASSLSSSSPSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSASSSSSSSSSSSAATGANSCAPQGARLKQGKD
QSKARRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAET
SSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKRG
AAESRRQDKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMG
RLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAI
EMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVV
VDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQR
NALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENL
LQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETLR
FLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTTE
GAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGT
ARAIQRKPNPLANPTTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQK
LPDVFSVYFRREGVMHQVKNLSESEVFLISPPKACTSGTASLCTTTITTATTTAASNVTP
DLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSVSNNRDKIKAWI
KEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQVDSGVECLEEISSIVSESDV
SSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFGCPIPGQEPLGRLDPTENG
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSG
SVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIWY
KPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNLLESYLISDP
PEGITFDDPSMEVVLLLRVLHSISRYWFYLYDNAACKEIIPIGEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALV
SQELQRADLGLWRGEEVSLSNPKGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFR
FLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLVNIDPGVAKSIQHLEDIIRQ
KKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNL
EEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQCFYPEELDQLLCGSKSESWDVKT
LMECCRPDHGYTHDSRAVRFLFEVLSSFDVEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFELTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccccacctgaaagtagaagatctaattctaaggcttccaaagcccca
cccagctctgccgtcggctccgcccgcggccacgcctctcgaaggaacagcctctctcta
tccgtgagttcacactcgattccagatccagacttggaagcagcagggacttcaggccag
caggggagacgggagggcagcagtacccgtgctctcaaacgcagctccgctttagagccc
aacatcaccttttcgcccagcccgcccaagcggcccaaagcggtgtccagccaccttttg
gagagttcatccagtgggccatcggcccccgcaacctcacctgaagttacagagccgagg
aaggctccagcgtctgtcagcaccaagtccaaaaagagacggttagcagccgagccggct
cccgccaaagccctgagcaagaagagcacgtcctatctaggccctagtggggcctcgatc
accccctctcaaaagcgcaagaaggcaggcgcctcgtcattgtcgtcctcctctccttcc
tccctccccagctctagcagcgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcttcctctgcctcttcctcgtcctcctcgtcctcttcctcctcg
gccgccacaggcgccaacagctgtgcccctcagggtgcccgactaaagcagggcaaggac
cagagcaaagcgcggcggtcacgctccgcatcctccccatctccccgaaggagcagccgg
gataaagagcagagcaaggctgctggctcctccaagtttgactggacatcccgcttcaac
tccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgagacc
tcctccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtctact
aagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgtcag
aagaccacgggctcttgcgccagtaccagtcggcgaggctcaggcctgggcaagcgcggg
gcagccgaatctcgccgacaggataaaatggccgactccgacaacaatcaggatggggcc
aattcatcggccgcgcgcacagaggagacaccacaaggggcgtcagcgtctagctcagtg
gctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatggga
agactgcaagctctactggaggccaggggccttcctcctcacctgtttggcccatttgga
ccccgtatgtctcagctgtttcataggaccatcgggagtggagctagctcaaaggcacag
cagctgctgcaggggcttcaggctacaggagacgaatcccagcagctccaggctgctata
gagatgtgccagctgctagtgatgggtaatgaggagacactgggaggattccccgtcaag
agcgtcgtacctgccctgatcacactgttacagatggagcataattttgatattatgaat
catgcatctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtggtg
gtagacgccatccctgtcttcctggaaaagcttcaggtaatacagtttatcgatgtggca
gagcaagccttgaccgccctggagatgttgtcacggaggcacagcaaagccatcttacag
gctggaggtctagctgactgtttgctgtacttggagttcttcagcatcaatgctcagagg
aacgcattagccatcgctgctaactgctgccagagcatcacgccagatgagtttcacttc
gtcgctgactctctgcccctgctcactcagagactcacacaccaggataaaaaatctgtc
gaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaacctg
ttacagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctggtgctcacc
ccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctctctcatgtgc
tccaactgcccatgcttggccgtgcagctcatgaaacagaatatagcagagaccctgcgt
ttcctgctctgtggagcatctaatgggagctgtcaagagcagattgaccttgttcccaga
agcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctgccc
agagagggcatctttgcggttgatgccatgctaaagaaaggcagtgcccagaccacggag
ggtgccatctggcagtggagagatgataggggcctgtggcacccgtacaaccgcattgac
agccgcatcattgaaactgcacaccagaacggagaagatgagataagtctgtcgacactc
ggccgtgtctacacaatcgacttcaactctatgcagcagataaatgaagacactggcact
gcccgtgccattcagagaaaacccaaccctctggccaaccccactacaggagggcacttg
gaggtgcggcgagaggacgcacgagctcagctgatgaaagaagaccctgagctggccaag
tgcttcataaagactctgtttggggttctgtatgaggtgtacagctcctcagctgggcct
gccgtcagacacaagtgccttagagccatcctccggatcatctacttcgcagatgcagag
ctgcttaaagacgtactgcgcaaccatgctgtgtctagccacatagcttccatgctgtcc
agtcaggacctgaagattgtagtcggctctttgcagatggctgagatcctcatgcagaag
cttccagatgttttcagtgtttatttcaggcgggaaggtgtaatgcaccaggtaaagaat
ctatctgaatctgaggtgttcctcatcagtcctccgaaagcgtgcaccagcggcacagct
agtctttgcaccaccaccatcaccacggcaaccactacagctgcctctaatgtcacaccc
gacttaggctcgcccagtttccagcacagcatggatgactcgctggacctcagtccacag
ggtaggttgagtgatgttctcaaaagaaagcgccttcctaaaagaggaccaaggcgtcca
aagtactccccacccagagacgatgacaaagtggataatcaggctaagagtccaacaacc
acacagtcccccaagtcctctttcctggccagtttaaatcccaagacctggggtaagctg
gggactcagacaaacagtgccaactcggagccctcacgcactgcaggggtcagtggtctg
gcacgagtgccgcccaaggactctgtttcaaacaacagggataaaataaaggcttggata
aaggagcaagccagcaaatttgtggagcgttactttaattctgaaagtgtggatggaagc
aaccctgcactgaacgtcctgcaaagactctgcactgccacagaacagctgaacttgcag
gtggacagtggtgtagagtgtctagaggagataagcagtattgtatctgaatcagacgtg
tcctcctttgagatccagcacagtgggcttgtgaagcagctgttgttgtatctgacatca
aacagtgaacgggacactatcagtagagacgagagaatcaagaggttcctgcatgtgttc
ttcggctgcccgataccagggcaggaacctctgggacgtttggacccaacagagaatggc
ccactgctggcattggtgcacaagatgaacaactgccttagtcagatggaacagtttcct
gttaaagtgcatgattttcccagtgggaacggcaacggaagcaggggttcacaagccctc
aagttctttaacacacatcagttgaagtgccagctgcaaagacacccagactgcaccaat
gtaaagcagtggaagggcgggccggtcaaaattgaccccttggccctagtacaggctatt
gagagataccttgtggttagagggtatggaaggatcagggaggaggatgaagacagtgat
gatgatggttctgatgatgagattgatgaatctttggctgcccagttcttgaattctggg
agtgtacgtcacagactacagttctatataggagagcacctgctgccgtacaacatgact
gtttatcaggccgtcaggcagttcagcttacaggccgaggaggagcgagagagcacagat
gatgaagcaaatcctctggggcgggctggcatctggaccaaaacacacactatatggtat
aagccagtcagagaggatgaagagggctgtaaagacgctgttggagggaagaggggtcgt
gcacagacggctcccactaaaacctcccctcgaaatgccaagaaacaggatgaactgtgg
catgagggtgtgtgtcccagtgtgacaaacctattagagtcatacctcattagtgatcct
ccagagggcatcacttttgatgacccttcaatggaggtggttctgctgctgagggtcctg
cactccatcagtagatactggttctacctgtacgataatgctgcatgtaaggagatcatt
cccattggtgaatttattaacagtaaactgacagcaaaggccaacagacagttgcaggat
ccgctggtcatcatgacagggaacattcccacctggctcactgagctcggcaaaacctgt
ccattcttcttcccgtttgacacacggcagatgctcttctacgtgactgcgtttgaccgc
gatcgtgccatgcagcgtctgctcgacaccaacccagagattaaccagtccgactcacaa
gacagccgtgtcgctccacgccttgataggaagaagagaacgataaaccgtgatgagctc
ctgaagcaagcagagtcagtaatgcaagatctcgggagttccagagccatgctggaaatt
caatacgagaacgaggtgggaacaggtctcggccctacgcaagagttctatgctctggtg
tctcaggagttgcagagggccgatttgggtctttggagaggagaggaagtctctctttcc
aaccctaaagggagtcaggagggtaccaaatatatgttcagttccagagggttgtttgct
gtaccgtttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaagttccgt
tttcttgggaaactcatggctaaagcgatcatggacttcagattgttggacttgcctcta
ggtttgccattctataagtggatgctgaggcatgaatcctccatcagctctcatgatctg
gtcaacattgatcctggcgttgccaaatccatccagcacctggaggacatcatccgccag
aagaagagaatagagcaggacagatcacatacacgggagaccctacagcaggccttggag
agtctcaacatgaatggctgctcggtggaagatctgggcctggacttcactctgcctgga
ttcccaaacatcgagttgaagaaagggggcaaagacgtgccagtcaccattcacaacctg
gaggaatacctcagattggtggtctactggacgctcaatgaaggcgtgtctcggcagttt
gagtcgtttagggaaggatttgagtctgtcttccctctgcaacatctgcagtgcttctat
cctgaagagctggatcagttgttatgtggcagtaagtcagagtcctgggatgtgaagaca
ctaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtgcgtttc
ttgtttgaggtgctgagcagttttgatgtagagcagcagagacttttcctgcagtttgtc
acaggcagccccagacttcctgtcggaggattccggagtttaaaccctcccctcactatc
gttcggaagacgttcgagttgaccgagaacccggacgacttccttccgtcggtgatgacg
tgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgagaaactg
ttgattgctgcgcgcgagggccagcagtctttccatctgtcttga
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integrated database retrieval system
