Sinocyclocheilus rhinocerous: 107711088
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Entry
107711088 CDS
T04916
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04080
Neuroactive ligand-receptor interaction
srx04082
Neuroactive ligand signaling
srx04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107711088
04082 Neuroactive ligand signaling
107711088
04519 Cadherin signaling
107711088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107711088
Ion channels [BR:
srx04040
]
Ligand-gated channels
GABA-A
107711088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
107711088
NCBI-ProteinID:
XP_016371499
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MNSLSWTFAGMGYGPHCSAKMRSLWVGVLFMTFTCHLSLSQTTTGIPKESELNDNITVFT
RILDGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLC
FKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTIS
AECPMQLEDFPMDTHACPLKFGSYAYPISEVVYKWTKGPGMSVVVAEEGSRLNQYHLIGH
TVGTEDISSSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPART
VFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWA
WDGKKALEAQQPKKKDPLALSKKPNNACSSGVNFTPNITKDAAISTISNSTTVQLKSAET
KPAMDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaactccctatcctggacttttgcaggtatgggatatggaccacattgcagcgctaaa
atgagaagtctgtgggtcggtgttttgttcatgactttcacctgccatctgagcctttct
cagactactacagggattcctaaagagtcagagctcaatgataacatcacagtattcaca
cgaatcctggatggattgctggatggctacgataacagactgcgacctgggcttggagag
aaagtgacagaaataaaaaccaacatctttgtgaccagctttggaccagtgtcagatact
gagatggaatacaccattgatgtgtttttccgtcaaagctggaaggatgaacgtttgtgt
ttcaaggggccgatggagatgctacctctgaataacctgctggccagtaatatctggaca
ccagacacctttttccttaatggcaaaaaatccattgctcacaacatgacaacgcccaac
aagcttctgagactgaaggatgatgggacattgctgtacaccatgagattgaccatatca
gcagagtgtcccatgcagttggaggatttccctatggatactcatgcctgcccactcaaa
tttggcagctatgcctaccctatctcagaagtggtgtataagtggactaaaggtcctggc
atgtctgtggtagtggcagaggaagggtcacgtcttaaccaataccatctgatcggccac
actgtcggtacggaagatatcagctcaagcagaggtcaatacacagtcatgatggcccat
ttctacctgaagaggaagatcggttactttgtgattcagacctacatgccctgtttcatg
actgtcattctgtcccaagtctcattctggctcaaccgtgaatctgtccctgccaggacg
gtctttggtgtgaccacagtgttgaccatgaccaccctcagcatcagcgcccgcaactct
ctgcccaaagtagcatatgccactgcaatggattggttcatcgctgtttgctatgccttt
gtgttctctgcgcttattgagtttgccacagtcaactacttcaccaaacgcagctgggct
tgggatggaaagaaggccttggaggctcagcagcctaaaaaaaaagacccactggcactc
tccaaaaagcccaacaatgcctgttcgtctggagttaacttcacccccaacatcacgaag
gatgctgctatctcaaccatctccaacagcaccactgtccagttgaaaagcgccgagacc
aagcctgcaatggaccccaaaaagacctacaacagcgtcagcaaaattgacaagatgtcc
cggattgtgttcccggtcctctttgggactttcaacttggtctactgggccacatatctc
aacagggaaccggttattaaaggagccgtttag
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