Sinocyclocheilus rhinocerous: 107711809
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Entry
107711809 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107711809
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srx01002
]
107711809
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107711809
03036 Chromosome and associated proteins [BR:
srx03036
]
107711809
Peptidases and inhibitors [BR:
srx01002
]
Metallo peptidases
Family M1
107711809
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107711809
Coactivators
SAGA/TFTC/STAGA complex
107711809
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107711809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
107711809
NCBI-ProteinID:
XP_016372343
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MDFPSFTNAVEDYPVLFVERCEEYFAVQLLSDEEVIAALTAVLRSTAKDWWIAERWKKDM
TEKELIQAILRNCNPRLASLLRGTVKDVGELVTRFCLPQLLPLLKHTMSYLHEIFEFYEE
ILTCRYPYSSFKTVFVDEAYVQVSSYASMSIFSTNLLHSGMIIDQTPMTRRCLAQALAQQ
FFGCFISRMSWSDEWVLKGISGYIYGLYLKKTFGVNEYRHWIKEELEKIVEYELKMGGVL
LHPTFSGGKEKDNPTPHLHFSIRHPHTLSWEYYEMFQCKAHLVMRLIENRISMEFMLQVF
NKLLSLASTASCQKYQSHMWSQMLVSTSGFLKSISNVSGKDIGPLIKQWVDQSGVVKILG
SFAFNRKRNVLELEIRQDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCH
SKSRRNKKKKVPLMNGEEVDMDLSAMDADCPLLWIRIDLDMSILRKVEFEQADFMWQYQL
RFERDVVSQEEAELEKFLTPASRLALTDILDQDQCFYKVRMQACFCLAKIANSMMNTWTX
PPAMKSLFTRMFCCKSCPNIVKTNNFINFQSYFLQKTMPVAMALLREVQNLCPKEVLNFI
LDLIKYNDNRKNKFSDNYYHAELIDALTNSLTPAISINNEVRTVDNLNADVRLILEEITR
FLNMEELLPSYRNTITVRCVVSLHAF
NT seq
2059 nt
NT seq
+upstream
nt +downstream
nt
atggatttccccagtttcactaatgcagttgaggattatcctgtattgtttgtggagcgc
tgtgaagagtatttcgccgttcaactcctcagcgatgaagaagtaattgctgctctcact
gctgtgttaagaagcactgctaaggattggtggatagcagaaaggtggaaaaaggacatg
accgagaaggaattgattcaagcaattctaagaaactgcaatccacgtttagctagttta
cttcgtgggacggttaaagatgtgggggaattggtgactcgtttttgcctgcctcagctt
ctgcccctgctgaagcacaccatgtcctacctgcatgagatttttgagttctatgaggag
atcctcacctgccgctacccttattctagcttcaagaccgtctttgtggatgaggcttat
gtgcaggtctcatcatatgcatccatgagtattttcagtaccaacctcctgcacagtggt
atgattatagatcagactcctatgaccaggcgctgtctggctcaagctctggcccagcag
ttttttggatgcttcatctctaggatgtcctggtctgatgagtgggttttaaagggaatt
tctggatacatttatggcctctacctgaagaaaacctttggagtcaatgagtatcgtcac
tggattaaggaggaactggaaaagattgtggagtatgagctcaagatgggtggagtcctg
ctacatcccaccttttctggaggaaaagaaaaagacaatccaacaccccacctgcacttt
tccatcagacacccccacacattgtcctgggagtattacgagatgttccagtgcaaagcc
cacctagtcatgaggctcattgaaaacagaattagcatggaattcatgttgcaggtgttt
aacaagctcttgagtctggccagcacagcctcatgccagaaatatcagtctcacatgtgg
agccagatgctggtgtccacctctggattcctcaaatccatttccaacgtatcagggaag
gacatcggacccctcatcaagcaatgggtagaccagagtggggtggtaaaaattttggga
agttttgccttcaacaggaaaagaaatgttttggaactagagatccgtcaggactacaca
tcatctggcacacagaaatatgtgggccctattaaagtgaccgtgcaagaactggatggg
tcatttaaccacacattacagatagaggagaacagtctcaaacatgacattccgtgccac
tccaaaagcagaaggaacaagaagaagaaagtccctctgatgaatggagaggaagttgac
atggacttgtcagccatggatgctgactgtcctctgctgtggatccgaatcgatctggac
atgtccatcctacggaaggtggagtttgaacaggccgatttcatgtggcagtaccagttg
cggtttgagagggatgtggtgtcccaggaggaggcagaactggaaaaatttctcacacca
gcctcacgacttgctctcactgatattttagaccaagaccagtgcttttataaagtccgc
atgcaggcctgcttctgtctggctaagattgctaattccatgatgaacacctggactngg
cccccagccatgaagtctctttttacacgcatgttctgctgcaaaagctgcccgaatatt
gtcaagaccaacaacttcatcaattttcagagctacttcctgcaaaagactatgcctgtg
gccatggctctgctcagagaggttcagaatctgtgtcccaaagaggtcctcaactttata
ctggacctcatcaaatacaatgacaaccggaagaacaagttttctgataattactatcat
gctgagctgattgatgccctgacaaattcactgactcctgccatcagcattaataacgag
gtgcgcacagtggacaacttaaacgcagatgttcgcctgattttggaggaaatcacacgc
tttcttaacatggaagaactgctgccaagctatcgtaacaccataactgtcaggtgtgtg
gtctctttacatgcgtttt
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