Sinocyclocheilus rhinocerous: 107712218
Help
Entry
107712218 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107712218
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107712218
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107712218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107712218
NCBI-ProteinID:
XP_016372870
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQTAVDSAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSNVKCAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYSKKFIDSEYQFGSSLV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacgatgttgataatgagctgttggactatgaggaagacgaggagccgcag
accgccgtggacagtgcagtcccagctggcaagaaggaggtgaaaggctcctacgtctcc
attcacagctccggcttccgtgatttcctcctgaaaccagagctgctccgcgcgatcgtc
gactgtggctttgagcatccttctgaggtccagcatgagtgcattccacaagccatcttg
ggtatggacatcctgtgccaggcaaagtctggtatgggaaaaaccgccgtgtttgtgctt
gccacacttcaacagatcgagccagtggatgggcaggtttctgtgttagttatgtgccac
acacgtgaactggcctttcagatcagtaaagagtacgagcgcttctccaagtacatgtcc
aacgttaagtgtgctgtcttcttcggtggtttgtccataaagaaggatgaggaagtgctg
aagaagaactgccctcacattgtagtgggaacaccaggaagaatccttgccctcattcgc
aacaagaccttgaacctcaaaaatgtcaaacactttgtgttggatgaatgcgacaagatg
ctggagcagctagatatgagacgggatgtccaggatatcttcagactgacccctcacgag
aagcagtgcatgatgttcagtgccacattaagcaaagagatcagaccggtctgtcgcaaa
ttcatgcaagatccaatggaagtgtttgttgatgacgagactaagcttaccctgcatggt
cttcagcaatactacgtcaaactaaaggacagcgaaaagaaccgcaagctgtttgacctg
cttgacgttctcgagttcaaccaggtggtgatatttgtcaagtcagttccgcgatgtgtg
gctttgtctcagctgttggttgaacagaatttccctgccattgcgatacacaggggaatg
gctcaggaagaaagattgtcccggtatcaacagttcaaagattttcaacgtcggatcttg
gtggctactaatctgtttggtcgtgggatggatatcgagcgtgttaatatcgttttcaac
tatgacatgcctgaagactcagacacgtacctacacagggttgctcgtgctggtaggttt
ggtacaaaaggattggccgtcacctttgtatcagatgagacggatgcaaagaccctgaat
gatgtgcaggaccgttttgaagtcaacgtcgctgagttgcctgaggaaatcgacatctcc
acctacagtaagaaatttatcgattctgagtatcagtttggctcatccctagtttaa
DBGET
integrated database retrieval system
