Sinocyclocheilus rhinocerous: 107712258
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Entry
107712258 CDS
T04916
Symbol
trim45
Name
(RefSeq) tripartite motif-containing protein 45
KO
K12021
tripartite motif-containing protein 45
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107712258 (trim45)
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107712258 (trim45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_2
Ig_GEX2_N
Snapin_Pallidin
Alpha_TIF
Motif
Other DBs
NCBI-GeneID:
107712258
NCBI-ProteinID:
XP_016372927
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MSLCKEQLVHEEKQEAVLSTLGDTGKKSRAVCGVCSRTYRDPKILPCLHTFCADCIRQLE
PFSVRRVNGERRSPEDDMQGRNSGSTILCPECDSEVDLPPSGVDGLTIDHLALDEVFAET
LLVDCRVLCDLCSESDAGKRCEVCCVNLCDFCSQAHRRQKRTTSHSIQSLQELKCQGRLT
RPVLCSLHPGQELRLFCESCDFTVCLECAATFHRDHHCSSAHEVISHHGDRIRDLVVRSL
RPRLVRLEDSLRRVDTSQEMLQTRTDTLAGEIRAFARSYASAVEAHCCSLLRSLEDLRLQ
HRNQLHLQKAQQQQALSDVRGGVDFAERLLTCGSDAEILSAKGVTMRRLMNLVESGFDPH
PTTVAHDNANSICFLPQESAGEVQGFPVVGVIHAKTVDPSKCTIQGEGVEGGREGQRGEF
TLVCRDSSGEQMGQGGDPVLVSIGGCSVEAAVVDKGDGSYGVSYTPAEAGLYSVWVCVKA
QDVKGSPFVLNVKRKFRCHRGIFHCCSFCSSGGTKEARCGCTGTMPGGFQGCGHGHTGHP
GKPHWSCCGSVVEASECILHNLGSVSPRGHLRTVEL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcactttgcaaagagcaattagttcatgaagaaaagcaagaagcagtcttgagtaca
ctgggggacactggaaagaagtccagagcggtctgtggtgtttgtagtcggacgtatcga
gaccctaaaatcctgccctgcttgcacacgttctgcgcggactgcattcgccagctcgag
ccgttttctgtgcgtcgcgtgaacggggaacgacgttcgccagaagatgacatgcagggg
cgcaactctggctcaacaatcctgtgtcctgagtgcgattcagaggtggatctgcccccg
tccggtgtggatgggctgaccattgaccatcttgcgctggacgaggttttcgcggagacc
ctgctggtggactgcagggttttgtgcgacttgtgcagcgaaagtgacgcggggaagcgc
tgtgaggtgtgctgtgtcaatctctgcgacttctgcagtcaggcccacaggagacagaag
aggaccacctctcactctatccaaagcctacaggagctgaaatgtcagggtcgtctcact
agacccgtcttgtgctcactgcatcctggccaggagttacggctcttctgtgagtcctgt
gacttcaccgtgtgtctggagtgtgcggccacctttcaccgtgaccaccactgtagctct
gcccatgaagtcatcagtcatcatggcgatcgcatcagggatctggttgtcaggagctta
aggccccgtcttgttcgtctggaggactctctgagacgcgtggacacttcccaagagatg
ctgcaaacacggactgatacattggcgggtgagatccgggcgtttgctcggagctatgcc
agcgcggtggaggcacattgctgttcactactgcgatcactggaggacttaaggttgcag
cacaggaaccaactccatctgcagaaagctcagcagcagcaggccttgtctgacgtccgt
ggtggggtggactttgcagaacgcctgcttacgtgtggttctgacgctgaaatcctcagt
gccaaaggagttactatgaggagactgatgaaccttgtggagtcgggattcgacccacac
ccaacgacggtcgcccatgataatgccaacagcatctgtttccttccccaagagagtgct
ggggaggtgcagggatttcctgtggtgggagtcatacatgccaagactgtggatcccagc
aagtgcacgatccagggagaaggtgtggaaggaggtcgtgaaggccagaggggagagttc
actctggtttgcagggactcctccggagagcagatgggccaaggtggagaccccgtgctg
gtcagcatagggggatgctctgtggaggcggctgtggtggataagggtgatggttcctat
ggtgtgtcctacaccccagctgaagcaggtctttactctgtgtgggtctgtgttaaagca
caggacgtcaagggttcaccatttgtgctaaatgtgaaaaggaagttcagatgtcaccgt
ggcatattccattgttgttccttctgctccagcgggggcactaaagaggcacgctgtggc
tgcacaggaactatgccaggagggtttcagggttgtggacatggtcatacaggacacccc
ggtaagccccactggtcatgttgtgggagtgtagtggaggcctcagagtgtattctacat
aacctgggcagcgtttctcctcgtggacacctcaggactgtggagctctga
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