KEGG   Sinocyclocheilus rhinocerous: 107712496
Entry
107712496         CDS       T04916                                 
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04510  Focal adhesion
srx04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:srx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107712496 (lamb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107712496 (lamb1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C DUF7652 BNR_6
Other DBs
NCBI-GeneID: 107712496
NCBI-ProteinID: XP_016373253
LinkDB
Position
Unknown
AA seq 1736 aa
MLLQLAALLILGAWGLADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGHQKPEPF
CIVSHLQEEKKCFVCDSRGTYDESTHQVTSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFRTFRPAAMVIERSSDFGKTWQVYRYFAYDCETSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEAIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGAGEVMDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYRASGNVSGGVCD
DCKHNTMGHKCEQCKPYFYQHPEKDIRDPNICESCNCDPVGSLDGGVCDPLTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PYSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGLNYTVRLSLSRYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
MVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSAFLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEASGQCECIP
GAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDLLTGQCLSCRDHTTGHHCKRCLNGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSLDSNQVFCVCNQGYKVYHTEGEGCNRCK
LGYHGNALTQSCRKCVCNHMGSVEETCPSPGNCNCDLNSGQCQCLPNVVGQNCDQCAPDT
WNMASGRGCEACDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHAC
DCDPRGIAEQQCNKVTGHCVCVEGVSGPRCDTCARGYTGEFPHCKRCHQCFAEWDVIVGD
LTNQTHRLVQKVNTIKATGITGPYQATINNVESSANSIRNILAQNPATQPLTEIQGLLEQ
ATALMAEMNTNLNLTEETLSEISSDNNSTDTKLKSLNEEAQKLEQTVKDLQKQVEFVKNS
DIRGARASVTRYYEQSQMAEIRANASTIDPDNLVNQSATLRTETEDLMNQTKEEFIQRQD
EFAKKLDNLAGQLETLDLTDLSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCD
GLATLAHNAWQKAKDFDLEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKK
RVDGSNEELRQLIKQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERV
GSLTEVEDILNQSAADILRAESLLEQARKARKEATDVKDTAEMVKEALQQAERAQSSVTE
ALKQATADIKGTQDLLVSVESETSDSELKLSNATRRLLKLESDVVLLKEKALNTSTSANS
TEKEADSINALAEQLKKDLDSELKDKYSSVEELITQKAEGVAEAKKRAEKLQQEAKNLLL
QASDKLQLLKNLEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5211 nt   +upstreamnt  +downstreamnt
atgctgttacagctcgcagcccttttaattttaggggcatggggtctcgcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcctgccacaggagatcttctcatt
ggaagagcacaccaactctcagccacctccacatgcggacaccaaaaacctgagcctttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccaggggaacc
tacgatgaaagcacgcaccaagtaaccagccacagaattgaaaatgtcgtgactacgttc
gccccgaaccgcctcaagacttggtggcagtcagaaaatggcctggagaacgtcacaatc
cagttgaacctggaggcagagttccacttcacacacctcatcatgacctttagaacattc
agacctgctgctatggtgatcgaacggtcgtcagacttcgggaagacttggcaagtgtac
cgttacttcgcctatgactgcgagacctccttccccttcgtctctcaaggacccatgacc
aaagtggacgatgttatctgcgattcccgctactccgacattgaaccctcaactgagggt
gaggccatctttagggttttggatccagccttcaggattgatgatccctacagccccaga
attcaaaacatgttaaagatcactaatctgagggtgaagttcacgaagctgcatactctc
ggggacaatcttctggactcacgtatagagatcaaggagaagtactactatgcgatttat
gacatggtggtgagaggaaactgtttttgctatggtcacgcatccgaatgcgcccccatc
gatggagctggagaggtcatggacggcatggtccatggccattgtatgtgtaatcataac
accatggggctgaactgtgagcgctgtcaggacttttaccatgacctgccctggagaccc
gcggagggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgattcc
tgtcatttcgacatggccgtgtatcgggcctcgggtaacgtgagcggcggcgtgtgcgac
gactgcaaacacaacaccatgggtcacaagtgtgagcagtgcaagccctacttctaccag
catccggagaaagacatccgcgaccccaacatctgcgagtcctgtaactgtgatccggtc
ggctctctcgacggtggagtgtgtgatccgctgacagacgtgtctctcgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggtgagcgctgtgaccagtgcaaacagggc
cattacggactcagcgacgaccctctgggatgccagccatgcacatgcaatgctttgggg
acagttccaggtggaagtccatgtgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcaatcaacaacaattgctctcca
gaaacgggtcagtgtcagtgtcgcgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccactacacttatgaagctgaggacgccaagttt
ggacctggtgtgacggttgtcccgagaccccagcctcaggacagatcccctacttggact
ggcattggttttgtgaacgttcctgaaggtgcctatcttgagttcagcatcgacaacatc
ccctactctatggagtatgacattatcatccgatatgagcctcagctgccagagcagtgg
gaggaagtgttgatgactgtcatcaggcctcgcgtcattaccgccgacagccgctgtgca
aacacaatgcccgacgatgacaaccaggtggtgtctctgcatcccggatccaggtatgtg
gtgctgtctaggcctgtgtgttttgaagagggcttgaactacacagtgcgcttgagtctg
tctcgctactcggctctcagtgatgtgcagtcgccgtacacgctcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctgggtcagagggtggagac
atggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaacagccaa
gcagtggtgaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcggct
tttctgcaccagggagttaaagcctgtcagtgtgacccgcaggggtctctcagcacggtt
tgtgacccgagcggtggccagtgccagtgtcggcccaacgtggttggcaggaactgcgac
aaatgtgccccagcgaccttcctttttgggccgcaaggctgcaggccatgtgattgcagt
cctgaggggtctgtccactccttctgccacgaggccagcggtcagtgcgagtgtattccc
ggagcgtatgggcggcagtgcgaccgctgtctgccgggatactggggattccctaactgt
cgcccctgcacttgcaatggccacgctgagcagtgcgacctgctcacgggacagtgtctg
tcctgcagggaccacaccactggacaccactgcaagaggtgtttgaatggctactatggt
gaccccgtcctgggctctggagaccactgccgcccctgcatgtgtccggatggtcccggc
agcggaagacagttctccggcgcgtgttataagagcctcgactccaaccaggtgttctgc
gtctgcaaccagggatataaagtgtaccacaccgagggcgagggctgcaaccgctgcaag
ctcggttatcacggcaatgcactgacccagagctgcagaaagtgtgtgtgtaatcatatg
ggctctgttgaggagacgtgcccctctccgggtaactgcaactgtgacttgaacagcggt
cagtgtcagtgtcttcctaacgtggtgggccagaactgcgatcagtgcgcaccggacacc
tggaatatggccagcgggagaggctgcgaggcctgcgattgcgacctcaaccattccttc
agctcgtcctgcaatgagattatgggccagtgctcttgtaaacccgggtttggcggcaga
acctgccgagagtgtagagagctgttctggggaaaccctgaggtcaaatgccacgcatgt
gactgtgacccaagaggcatcgcggagcagcagtgcaacaaggtcacaggtcactgcgtt
tgcgtggaaggtgtttccgggcctcgatgtgacacgtgcgctcgaggctacacaggcgag
ttcccacactgcaagcgctgccaccagtgcttcgccgaatgggatgtaattgtgggcgac
ctcaccaaccagacccacagactggtccagaaagtcaataccatcaaagccaccggcatt
acgggaccctaccaggccaccatcaataacgtcgaaagcagcgccaactcgatccgcaac
atcctggcccagaatccagccactcagcctctaacggagatccagggacttctcgaacaa
gcaactgccttgatggctgaaatgaacaccaaccttaacctgacagaggagaccttgtcc
gagatctcatccgacaacaacagcacggacaccaaactgaagtccctcaacgaagaagct
cagaaactggaacagacggtgaaggaccttcagaagcaggtggagtttgtgaagaattca
gacattcgaggggccagagccagcgtgactcgatactatgagcagtcccagatggcagag
atccgtgcgaatgcctccaccattgacccagacaacctggtcaatcagtctgccaccctg
cggacagaaacggaggacttgatgaaccagaccaaagaagagttcattcaaaggcaggac
gagtttgcgaagaaactggacaacctcgctggacagctggagactctggacctgactgat
cttagcgagaagacatgtggcagtccagctggctcagagaactgtgccgactctccctgc
ggaggcctgagctgtgtggatggggaaggaaacaggaagtgtggaggagagggatgtgat
ggcctcgccacgctggcccacaatgcctggcagaaagccaaggactttgacctggagatt
atcagcgctatggaggaagtggacaagctctccaaaatggtgtcagaggcaaaggtaaaa
gcagatgaagcaaagcttaatgctcaagaagtgctggcaaaaaccaatgagaccaaaaag
cgtgtggatggaagcaacgaggagctacgccaactcatcaaacagatccgagacttcctc
actcaagatggagcggacctggaaagcatcgaggctgtggccaatgaagttctgcagatg
cagatgcccaccactccggcccagctgcagaacctgaccgcagagatcagggagcgtgtg
ggcagcttgacagaagtcgaggacatcctcaaccagagtgccgctgacatactgagagca
gaaagcctgctggaacaagcccgcaaggccaggaaggaggcgacagatgtgaaagacaca
gctgagatggtgaaggaggccttgcagcaggctgagcgcgcccagagttcagtaaccgag
gcactgaaacaggccactgctgacatcaagggaacgcaagacttgctggtctcggtggag
tctgagacgtccgactcggagctaaaactgagtaacgccacccgaaggctcctgaagttg
gaaagcgatgtagttctgctgaaagaaaaggctctcaacacctccaccagtgccaacagc
acagagaaagaggccgatagcatcaacgcactggctgagcagctcaaaaaggatctggat
tcagagctgaaggacaagtacagtagtgtcgaggagctgatcacacagaaggccgaagga
gtggcagaggccaagaaaagagcagagaaactccaacaggaagccaaaaatctgctgcta
caggccagcgacaaacttcagcttctgaaaaatcttgagaagagctatgatgaaaatcag
aagctgctggaggacaaggccaatgagctggtggatctggagaaggctgtgaaagaactg
cttcaggagatcagtcacaaagtcaccgtctacagcacctgtctgttttaa

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