Sinocyclocheilus rhinocerous: 107712496
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Entry
107712496 CDS
T04916
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107712496 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107712496 (lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
DUF7652
BNR_6
Motif
Other DBs
NCBI-GeneID:
107712496
NCBI-ProteinID:
XP_016373253
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MLLQLAALLILGAWGLADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGHQKPEPF
CIVSHLQEEKKCFVCDSRGTYDESTHQVTSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFRTFRPAAMVIERSSDFGKTWQVYRYFAYDCETSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEAIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGAGEVMDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYRASGNVSGGVCD
DCKHNTMGHKCEQCKPYFYQHPEKDIRDPNICESCNCDPVGSLDGGVCDPLTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PYSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGLNYTVRLSLSRYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
MVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSAFLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEASGQCECIP
GAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDLLTGQCLSCRDHTTGHHCKRCLNGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSLDSNQVFCVCNQGYKVYHTEGEGCNRCK
LGYHGNALTQSCRKCVCNHMGSVEETCPSPGNCNCDLNSGQCQCLPNVVGQNCDQCAPDT
WNMASGRGCEACDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHAC
DCDPRGIAEQQCNKVTGHCVCVEGVSGPRCDTCARGYTGEFPHCKRCHQCFAEWDVIVGD
LTNQTHRLVQKVNTIKATGITGPYQATINNVESSANSIRNILAQNPATQPLTEIQGLLEQ
ATALMAEMNTNLNLTEETLSEISSDNNSTDTKLKSLNEEAQKLEQTVKDLQKQVEFVKNS
DIRGARASVTRYYEQSQMAEIRANASTIDPDNLVNQSATLRTETEDLMNQTKEEFIQRQD
EFAKKLDNLAGQLETLDLTDLSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCD
GLATLAHNAWQKAKDFDLEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKK
RVDGSNEELRQLIKQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERV
GSLTEVEDILNQSAADILRAESLLEQARKARKEATDVKDTAEMVKEALQQAERAQSSVTE
ALKQATADIKGTQDLLVSVESETSDSELKLSNATRRLLKLESDVVLLKEKALNTSTSANS
TEKEADSINALAEQLKKDLDSELKDKYSSVEELITQKAEGVAEAKKRAEKLQQEAKNLLL
QASDKLQLLKNLEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacagctcgcagcccttttaattttaggggcatggggtctcgcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcctgccacaggagatcttctcatt
ggaagagcacaccaactctcagccacctccacatgcggacaccaaaaacctgagcctttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccaggggaacc
tacgatgaaagcacgcaccaagtaaccagccacagaattgaaaatgtcgtgactacgttc
gccccgaaccgcctcaagacttggtggcagtcagaaaatggcctggagaacgtcacaatc
cagttgaacctggaggcagagttccacttcacacacctcatcatgacctttagaacattc
agacctgctgctatggtgatcgaacggtcgtcagacttcgggaagacttggcaagtgtac
cgttacttcgcctatgactgcgagacctccttccccttcgtctctcaaggacccatgacc
aaagtggacgatgttatctgcgattcccgctactccgacattgaaccctcaactgagggt
gaggccatctttagggttttggatccagccttcaggattgatgatccctacagccccaga
attcaaaacatgttaaagatcactaatctgagggtgaagttcacgaagctgcatactctc
ggggacaatcttctggactcacgtatagagatcaaggagaagtactactatgcgatttat
gacatggtggtgagaggaaactgtttttgctatggtcacgcatccgaatgcgcccccatc
gatggagctggagaggtcatggacggcatggtccatggccattgtatgtgtaatcataac
accatggggctgaactgtgagcgctgtcaggacttttaccatgacctgccctggagaccc
gcggagggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgattcc
tgtcatttcgacatggccgtgtatcgggcctcgggtaacgtgagcggcggcgtgtgcgac
gactgcaaacacaacaccatgggtcacaagtgtgagcagtgcaagccctacttctaccag
catccggagaaagacatccgcgaccccaacatctgcgagtcctgtaactgtgatccggtc
ggctctctcgacggtggagtgtgtgatccgctgacagacgtgtctctcgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggtgagcgctgtgaccagtgcaaacagggc
cattacggactcagcgacgaccctctgggatgccagccatgcacatgcaatgctttgggg
acagttccaggtggaagtccatgtgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcaatcaacaacaattgctctcca
gaaacgggtcagtgtcagtgtcgcgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccactacacttatgaagctgaggacgccaagttt
ggacctggtgtgacggttgtcccgagaccccagcctcaggacagatcccctacttggact
ggcattggttttgtgaacgttcctgaaggtgcctatcttgagttcagcatcgacaacatc
ccctactctatggagtatgacattatcatccgatatgagcctcagctgccagagcagtgg
gaggaagtgttgatgactgtcatcaggcctcgcgtcattaccgccgacagccgctgtgca
aacacaatgcccgacgatgacaaccaggtggtgtctctgcatcccggatccaggtatgtg
gtgctgtctaggcctgtgtgttttgaagagggcttgaactacacagtgcgcttgagtctg
tctcgctactcggctctcagtgatgtgcagtcgccgtacacgctcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctgggtcagagggtggagac
atggtgaccaacagcgcctgggaaaccttccagcgctaccgctgtttggagaacagccaa
gcagtggtgaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcggct
tttctgcaccagggagttaaagcctgtcagtgtgacccgcaggggtctctcagcacggtt
tgtgacccgagcggtggccagtgccagtgtcggcccaacgtggttggcaggaactgcgac
aaatgtgccccagcgaccttcctttttgggccgcaaggctgcaggccatgtgattgcagt
cctgaggggtctgtccactccttctgccacgaggccagcggtcagtgcgagtgtattccc
ggagcgtatgggcggcagtgcgaccgctgtctgccgggatactggggattccctaactgt
cgcccctgcacttgcaatggccacgctgagcagtgcgacctgctcacgggacagtgtctg
tcctgcagggaccacaccactggacaccactgcaagaggtgtttgaatggctactatggt
gaccccgtcctgggctctggagaccactgccgcccctgcatgtgtccggatggtcccggc
agcggaagacagttctccggcgcgtgttataagagcctcgactccaaccaggtgttctgc
gtctgcaaccagggatataaagtgtaccacaccgagggcgagggctgcaaccgctgcaag
ctcggttatcacggcaatgcactgacccagagctgcagaaagtgtgtgtgtaatcatatg
ggctctgttgaggagacgtgcccctctccgggtaactgcaactgtgacttgaacagcggt
cagtgtcagtgtcttcctaacgtggtgggccagaactgcgatcagtgcgcaccggacacc
tggaatatggccagcgggagaggctgcgaggcctgcgattgcgacctcaaccattccttc
agctcgtcctgcaatgagattatgggccagtgctcttgtaaacccgggtttggcggcaga
acctgccgagagtgtagagagctgttctggggaaaccctgaggtcaaatgccacgcatgt
gactgtgacccaagaggcatcgcggagcagcagtgcaacaaggtcacaggtcactgcgtt
tgcgtggaaggtgtttccgggcctcgatgtgacacgtgcgctcgaggctacacaggcgag
ttcccacactgcaagcgctgccaccagtgcttcgccgaatgggatgtaattgtgggcgac
ctcaccaaccagacccacagactggtccagaaagtcaataccatcaaagccaccggcatt
acgggaccctaccaggccaccatcaataacgtcgaaagcagcgccaactcgatccgcaac
atcctggcccagaatccagccactcagcctctaacggagatccagggacttctcgaacaa
gcaactgccttgatggctgaaatgaacaccaaccttaacctgacagaggagaccttgtcc
gagatctcatccgacaacaacagcacggacaccaaactgaagtccctcaacgaagaagct
cagaaactggaacagacggtgaaggaccttcagaagcaggtggagtttgtgaagaattca
gacattcgaggggccagagccagcgtgactcgatactatgagcagtcccagatggcagag
atccgtgcgaatgcctccaccattgacccagacaacctggtcaatcagtctgccaccctg
cggacagaaacggaggacttgatgaaccagaccaaagaagagttcattcaaaggcaggac
gagtttgcgaagaaactggacaacctcgctggacagctggagactctggacctgactgat
cttagcgagaagacatgtggcagtccagctggctcagagaactgtgccgactctccctgc
ggaggcctgagctgtgtggatggggaaggaaacaggaagtgtggaggagagggatgtgat
ggcctcgccacgctggcccacaatgcctggcagaaagccaaggactttgacctggagatt
atcagcgctatggaggaagtggacaagctctccaaaatggtgtcagaggcaaaggtaaaa
gcagatgaagcaaagcttaatgctcaagaagtgctggcaaaaaccaatgagaccaaaaag
cgtgtggatggaagcaacgaggagctacgccaactcatcaaacagatccgagacttcctc
actcaagatggagcggacctggaaagcatcgaggctgtggccaatgaagttctgcagatg
cagatgcccaccactccggcccagctgcagaacctgaccgcagagatcagggagcgtgtg
ggcagcttgacagaagtcgaggacatcctcaaccagagtgccgctgacatactgagagca
gaaagcctgctggaacaagcccgcaaggccaggaaggaggcgacagatgtgaaagacaca
gctgagatggtgaaggaggccttgcagcaggctgagcgcgcccagagttcagtaaccgag
gcactgaaacaggccactgctgacatcaagggaacgcaagacttgctggtctcggtggag
tctgagacgtccgactcggagctaaaactgagtaacgccacccgaaggctcctgaagttg
gaaagcgatgtagttctgctgaaagaaaaggctctcaacacctccaccagtgccaacagc
acagagaaagaggccgatagcatcaacgcactggctgagcagctcaaaaaggatctggat
tcagagctgaaggacaagtacagtagtgtcgaggagctgatcacacagaaggccgaagga
gtggcagaggccaagaaaagagcagagaaactccaacaggaagccaaaaatctgctgcta
caggccagcgacaaacttcagcttctgaaaaatcttgagaagagctatgatgaaaatcag
aagctgctggaggacaaggccaatgagctggtggatctggagaaggctgtgaaagaactg
cttcaggagatcagtcacaaagtcaccgtctacagcacctgtctgttttaa
DBGET
integrated database retrieval system