Sinocyclocheilus rhinocerous: 107712510
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Entry
107712510 CDS
T04916
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107712510
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107712510
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMB1
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107712510
NCBI-ProteinID:
XP_016373269
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MLFVFICKGPAMLIRLETSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAGQLKASS
TCGLYRPQNYCILGYLENQRKCFICDTRSPYNLHHNPNSHRVENIITTFQPERKMSWWQS
ENGVHEVSIQLDLESVFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSF
TGVSEGLADSIDDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDPTIQELITLTNLR
VNFTRLITLGDTLLTRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDGTRGDTFSE
PGMVHAKCVCQHNTAGFNCERCQDFYHDAPWRPGGKTDSDVCRRCNCHGHSEKCHFDLAC
YLATGGVSGGVCDDCRNNRAGPQCDLCGPYYYQDPQRSMDDPNACIPCECNPDGSVDRGL
CDPVTGQCVCKQNVEGERCDRCKFGFYGFSRDDPSGCQLCRCNFMGTIRTGNPCDQTTGT
CICEPFAFGPQCDQCLPGYWGLGNTVYGCLPCDCDIGGALRTECSSVDGQCECRPNMVGP
KCSEPVLGYFLAPLDFYIYEAEHAAPRMAISPFIQAPPLVYPLEQIPVRPTKLPLCPSAP
KPSPTPYEEPEPPTVKPSPTRFNPHVTLPICEHYYRQRGYDFKISNGRVVVVKREKRRTR
RRRQGQRTIPFEPGSPLQVILQQRTPDQPITWTGLGFVRVQDGAGLRFNVSNIPATLDYY
VVVRYEPESTDDWTAFVNVVSFGSGDRRCLNDPFDKMFTLPAFGRTATLDLPICLSDGNK
YHVDITFRKKPSADPQISSYILIDSMGLIPKVDSLPNFCIQSYLAQFQQYRCIELGAQAG
QHTLPEVCEKLIGSMSAFIHNGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCT
PLTYGHGPGGCSPCDCDPSGSTAELCDQTTGQCSCREGVTARRCDKCYPGYYGFPLCRRC
QCNGLADICDLVTGDCLDCREHSAGPHCERCKDGYVGDPVSGKPCEPCLCPDVNGSGRFF
AISCNKDPYSGAPYCECLPGHTGLNCDSCSPGYYGDLRLPGGQCEECCCNNNIDPRDGEA
CDAVTGECLRCLHNTEGPRCQSCKRGYYGNALTQDCKECSCDRRGTDDTKCPAGSPCFCD
QETGQCPCRTGVKGTLCNECEDGYWNLDGESGCQPCNCDPEHALNYICDKITGQCFCQPE
YGGRKCDECGPNHFGNPDIQCMSCDCNMEGTIYPACDPYTGECLCKPGVIGLFCDDCAPG
HDTNFPACEPCHACYHLWEKIVSDVRLDIERIETKRPCPEDDRPISELQNLRNLLEKLQS
LANMTAKDELKKLEELLARIRNETETIDPNIIIIDPTILLNTDIDNIRLEFNRLLKNLRE
KTKEIPATDVKAINDILNKIKKLYEEFTDSEKKVEAAKKAQEASRKTRENVTLELSKCRI
GEMEKLERKAKALNVASLNEEVCGAPGDAECEKAKCGGASCGICGGPACTGSLPISLNAS
KLAEMTEKNITDLRSKLKEADAKLMGTSKMTNYIKDQAEDLMNKINQTKNKYEKEKIDTK
NLIEKLKNYLRDELVKPEDIEKLANAVLSIQLPKSPDEIKDMIEDIKRILANVTDFDNDL
EHLEKQARIAEDMKERAQEILNRTKAINVREIEKALNDTAKLNDKIVYDLDEAEENNDII
RGKVNETEPKLKNIEDNLDSTRAKKLLDEIKALKDKTEMNRAQGKEAKDAANAVLDSAKN
TEKDLEELKEQFEKLKLNSTNQNVNEEANERLKNITIEAETLAKNVEDKIKEIEELEKRI
LVAAERKEERIKDLEALQKEADDLRNFIVDKVDKYNLCST
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgctatttgtcttcatctgcaaaggtccagctatgctgatccgattggagacatcagcg
ttcctgctcctcttgatagctgctccagtccgcctccaggacgaatgtgtggggaattca
tgttatcctaacctcggtgacctcatggtgggccgcgccggccagctcaaggcttcttca
acctgtggactctacagaccacaaaactattgcatcctgggatacctagagaatcagcgc
aagtgcttcatctgtgacaccaggagcccctacaatctccaccacaatcccaacagccac
cgcgtagagaacatcatcaccaccttccaacctgaacgcaagatgagctggtggcagtcc
gagaatggtgtgcatgaagtcagcattcagttggatctggaatcagtgtttcagtttagt
catctgatattgacgttcaagagttttcggcctgctgccatgttggtcgagaggtcgaaa
gacttcgggagaacctggaaggttttccgttactttgcggaggactgtgccaactctttc
accggtgtctctgaggggctagcagacagtattgatgaccttatctgtgatagtcgctac
tctggggcagagccgtccaccgatggagaggtggtgttgaaagccttggatcccagtttt
gacatccatgatccttacgaccctactatacaagagctgatcaccctgacgaacctgcga
gtaaactttacccgtttgatcaccctgggcgacacgctgctcacgcgacggaggaggaac
ccacaggataagtactattatgccctctatgagatggtggttcgggggagctgcttctgc
aatggccacgctagtcagtgcattcccgtggatggcacacgtggagatacctttagtgag
cctggcatggtacatgctaaatgtgtttgccaacacaacactgcagggttcaactgtgag
cgctgtcaagacttctaccatgacgccccctggaggccaggtggaaaaacagactcggat
gtttgcagaaggtgtaactgccatggtcattcagagaagtgtcactttgacttagcatgc
tatctggccactggtggggttagtggtggtgtgtgtgatgactgcaggaacaaccgtgct
ggaccccagtgtgatctgtgtgggccatattactaccaggaccctcaacgctctatggac
gaccccaatgcctgtataccttgtgaatgtaatcctgatggctcagtggaccgtggtctg
tgtgatccagtgactggccagtgtgtgtgtaaacagaatgttgaaggagagcgctgtgac
cgctgcaagtttgggttctacgggttcagccgggacgaccctagtggctgtcagttgtgt
aggtgtaatttcatgggaactatacgcactggcaacccttgtgatcaaacaactggaaca
tgcatctgcgagccatttgctttcggcccacagtgcgaccagtgtctgccaggttattgg
ggtctgggaaacacagtctatggctgcttaccctgcgactgtgacattggaggggcattg
agaaccgaatgttcctcagtggatggccagtgtgaatgcaggcctaacatggtaggcccc
aaatgcagtgagccggtccttggatatttcctggccccgcttgatttctatatctatgag
gctgaacatgcagcacctcggatggcaatttctccatttatacaagcccctccattggtc
taccccctggaacagatacctgtacgaccaaccaagctccctctctgcccctctgcccca
aaaccctccccaacaccttatgaagaacctgaacccccaacggtgaagccgtctccgacc
cgattcaacccccatgtcacactacccatctgtgagcactactacagacagagaggttat
gacttcaagatcagtaatggcagggttgtggtggtaaagcgtgagaagcggcgaactcga
agacgaagacaaggccagaggacaatcccctttgaaccaggctcacctcttcaggtcatc
ctgcaacagcgcaccccagatcagcccatcacttggactggactgggttttgtgcgagtt
caggatggggctggacttagatttaatgtcagcaatataccagctactcttgactactat
gtagttgtccgctatgaaccagagtccaccgatgattggacagcttttgtgaacgttgta
tcttttggatcaggggatagacgttgcctgaatgacccgtttgataaaatgtttactctt
ccagcctttggaaggacagccacactggatcttccaatatgcctcagtgatggtaataaa
taccatgtggacattacttttagaaagaagcccagtgccgaccctcagatcagctcatac
atcctgattgactctatgggcctcattcccaaagtggactcactcccaaacttctgcata
cagtcatatctagctcagtttcagcaataccgttgtattgagttgggtgcacaggcagga
cagcacacccttcctgaagtatgtgagaaacttattggaagtatgtcagctttcattcac
aatggtgcagtgtcttgcaactgtcatcatgttggagcgtatggctcatcttgcagtaaa
ttcggtggacagtgtcaatgcaaacccaacgttattggtcggtgctgtgattcctgtact
cctctgacatatgggcatgggccaggtggctgctcaccatgtgactgtgatccgtctggc
tctaccgctgagctttgtgaccagacaactggtcaatgctcgtgtcgagaaggagtaact
gctcgtagatgtgataaatgttaccctggctactacggttttcccctgtgcagacgttgc
caatgcaacgggttggctgacatctgtgacctggtcactggagactgtctggactgcagg
gaacactccgctggaccccactgtgaaaggtgtaaggatggttatgttggtgaccctgtt
tctgggaagccatgtgagccatgcttatgtccagatgtgaacggaagtgggcgcttcttt
gccatttcttgcaacaaagatccatactctggagctccatactgtgaatgtctgcctgga
catacaggcctaaactgtgactcctgctctcctggttactacggtgatctgaggttgccc
ggcggccaatgtgaggagtgttgttgcaacaataacattgatcctcgtgacggtgaagca
tgcgatgctgtaactggcgaatgtttgcggtgcttacacaacacagaggggccgcgctgt
cagagctgcaaacgtggatactatggcaatgcgctcactcaagactgcaaagagtgttct
tgtgaccggaggggcacagatgacacaaagtgtccagctggaagcccctgtttctgtgac
caggaaactggccagtgcccatgtcgcacaggtgtcaagggaaccctatgtaatgagtgt
gaggatggatactggaacctggatggggagtctgggtgccagccatgtaattgtgatcca
gaacatgctctcaactacatctgtgacaagatcacaggccagtgtttctgccagccagag
tatggaggcagaaaatgtgatgagtgtgggccgaatcactttggaaacccagatatacag
tgcatgtcttgtgactgtaacatggaggggaccatttatccagcttgtgacccttacacg
ggtgagtgtttgtgtaagccaggggtgattggccttttctgtgatgactgcgccccaggt
catgacacaaactttcctgcctgtgaaccctgccatgcctgctaccacctctgggagaaa
attgtctcagatgttagactagatattgagaggatagaaactaaaaggccatgtcctgaa
gacgatcggcctatatctgaactacaaaacttaaggaatttgttggagaagctgcagagt
ctggctaacatgactgccaaggatgagctaaaaaaactagaggagctcttggcacgcatt
aggaacgaaacagagaccattgacccaaacataatcattattgatccaaccatactgctc
aacactgacatcgacaatatccgacttgagttcaacagactcttgaagaatctcagggag
aagacaaaagagattccagcgacagatgtaaaagctattaatgatattttaaataagatc
aaaaagctctatgaagaattcactgacagtgagaagaaagtggaagcagctaaaaaggcc
caagaagcctccaggaagacgagagagaatgttacattggaactttcaaagtgtcgtata
ggagaaatggaaaagctggagaggaaagcgaaagctctgaatgttgccagcctcaacgag
gaggtctgtggggctccaggcgatgcagaatgtgagaaggcaaaatgtggtggagcttca
tgtgggatatgcgggggtcctgcctgtacagggagtttacccatcagcctcaatgcctcc
aaactggcagagatgaccgagaagaacattactgatctgcgcagtaaactcaaggaagct
gatgctaagctcatgggcacctcaaaaatgactaattacatcaaagatcaagctgaggac
ctgatgaataaaattaatcagactaagaacaaatatgagaaggaaaagattgacaccaag
aacctcatagagaagctcaagaactacttgagagacgagctggtgaagccagaggacatt
gagaaactggccaatgctgtgttgtccattcagctgcccaaatcccctgatgagatcaag
gacatgatagaggacatcaagaggatcctggcaaacgtcacagacttcgacaatgatcta
gagcacttggaaaaacaagccagaattgctgaagacatgaaggagagggcccaagaaatc
ttgaaccgaaccaaggctatcaatgtgagggagatagagaaagcactcaatgatacagca
aagctcaatgacaagatagtctatgatctggatgaggctgaagaaaacaatgacattatc
agggggaaagttaatgagactgaacctaaactaaaaaatattgaggataatttggattcg
actcgtgccaaaaagttactggatgaaatcaaagccttgaaggataagacggagatgaac
agagctcaggggaaggaggccaaagatgctgccaatgcagtgcttgacagtgccaaaaac
accgaaaaggatcttgaggaactgaaagagcagtttgaaaagttaaaactgaatagcaca
aaccagaatgttaatgaagaggctaacgaacgtctgaagaacatcacaatagaggcagaa
acactggctaaaaatgtggaagataaaattaaggaaattgaagaattggagaaaaggatt
ctggttgcagctgaaagaaaagaggaaaggataaaagatttggaggcactccagaaggag
gcagatgacttgaggaactttattgttgacaaagtggataaatacaatctgtgctccact
taa
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