Sinocyclocheilus rhinocerous: 107712928
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Entry
107712928 CDS
T04916
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04270
Vascular smooth muscle contraction
srx04625
C-type lectin receptor signaling pathway
srx04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107712928
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107712928
09153 Circulatory system
04270 Vascular smooth muscle contraction
107712928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107712928
Membrane trafficking [BR:
srx04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107712928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
APAF1_C
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
107712928
NCBI-ProteinID:
XP_016373815
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MRFPKKASRTGSILSKDHPPDKKPKSDKASVPPSHEFDPTGLVQRCVIIQKDENGFGLTV
SGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSGSYVALTVLG
RPPGLPQIPLSDGEGEEGPLFSLTSPHSPGPIGPDRSSSSPSPSERKPTPLSVWAMTEEH
SRNPTPKLLKEIQDAKKHIPQHQEQLSKPSGTGQDGSLSPRPGEGEQEDRGGDLDRPPSW
QGDAGIEPAWTNNTTAPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSPDAEDTPDLD
SQSSVGSPSTRPVAHIIGAEDEDFDTEQEQMNGQCSCFQSVDLLKSRPAHLAAFIHHVVS
QFDPAPLLCYLYAELYKQTSSKETRRILMDTFFIEKPASLKVTVPESIIADLERTAHSIN
AERKRPEPISEDVHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAELARLDTERMR
DRVALEKERSCAEHIISKIEDVLLTSQATEEDKCSTMQFVILSYMKQLGVKVKESRGLEH
KPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFPNVFPQRRPSRIDTSAISRALEPRQRQTK
PQLPLGAGEQADGSSPPVRSSQSSEGSDGTTALVTSPPYSAPAAQGTDSINRESEAGGLP
SSALPRLGDGVVPGDLQDSSSSNTHFDFSPCTLEHLLEEEAETDKTQDTGTPRPDRSRME
PLGSGEVQSEDDQCAEVELEPPNWQTLVSRDVLSTLTPQEIKRQEVINELFYTERAHVRM
MKVLENLFYQPLIREAILPPADIKNIFSNLEEIVQLHMSLTEQMTAVRKKNETALIDSIG
DDLLSWFSGEEEAKIKRAAGTYCSNQPFALELIKSKQKKDQRFNSFIQEAESNRHCRRLQ
LKDIIPVETQRLTKYPLLLENIAKYTGTNLDLTKRKMVHEGPLSWKVNKDKTIELYTLLL
EDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRSVATDNRSFFVLSMS
DNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHNIIPLPQTDGEREAVELINSGVQK
LNKDSEPISLVSIQSPEKDGTEVMPTPPCSTNPFETKSDEEDEEEEEENSLQDQAEDDEA
FVVADMTDRLTFLKQRSRLGIAIDKDEAEAFELQPLRADEALRTLATLRQLLINHMSSQE
DTDRDIKRREQQEDVARTGSQQGAEDSTAIRSAVENGSERAENAQELPSGDTGFFETSED
CVSAGSYMVLEVYGGLGESSTDDDVQGSSGEPVAAGDSGIDLKKLLSSSSQSSGGPNLNR
QIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETATDTEENKDKS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttcccaaaaaagcgagcaggacaggaagtattctcagcaaggaccatccccca
gacaaaaagcccaaaagtgacaaggcgtcagtccccccctcgcatgagtttgaccccaca
gggcttgtgcagcgttgtgttatcatccagaaagatgagaatggctttgggctgacagtg
agcggcgataaccctgtgtttgtacagcttgtaaaagaggatggagctgccatgcgagct
ggtgttcagacaggtgaccggatcataaaggtcaatgggacattagttacacattcaaat
catgtagaagttgtaaagctaataaaatcgggctcctatgtggccctgacagtactgggg
agaccgccaggcctgcctcagatccccctctcagacggcgagggggaggaggggcctctc
ttctcactcacctcccctcactccccggggcccatcggtccagaccgctcgtcttcctcc
cccagcccctcggagcgcaaaccgacccctctgtctgtatgggccatgacggaggagcac
agcaggaaccctacacctaaactactgaaggaaatccaggacgccaagaagcacattcca
cagcaccaggagcagctcagcaagccctctgggactggacaggatggctccttatctcca
aggccaggagaaggagagcaggaggatagagggggagatttggatcggcccccttcatgg
cagggcgatgctggaattgagccagcgtggaccaacaataccacagcccctgtcactccc
agtcctgtcccagagagtccatgccaaagagagaccccctgccacagcccaaagaccaca
ccccgagacagcctcaactcttgtccttcaccggatgccgaagacacacctgaccttgat
tcgcagtcgagtgtggggagcccctccactcgtccggtagcacacatcattggtgctgag
gacgaagactttgacacagagcaggaacagatgaatggccagtgtagctgttttcagagc
gtagacctcctgaaatctcggcctgctcacctggcagctttcatccatcatgtggtctct
cagtttgaccctgcgccgctgctgtgctacctctatgctgaactttacaaacagaccagc
tccaaagagacacgacgaatcctcatggataccttcttcatagaaaaaccagctagcttg
aaagtaacagtgcccgaatccatcatcgctgacctggaacggactgcacactcaattaat
gcagaacggaagaggccggagcccatctcagaggacgtccaccggcaatatgtgcagcag
ctgcaggacacactactacctgacatccagaagaacctagaagacttcaggcacaagcgc
agtatgggtctgaccctggctgaagcagagctagcccgtctggatacagagagaatgaga
gaccgtgtggctttggaaaaagagcgatcctgtgcagagcacattatctctaagatagag
gatgtactattgacgtcacaggccacagaggaagataagtgtagcaccatgcagtttgtg
atactgtcgtatatgaagcagctcggcgtaaaagtgaaggagtctcgagggctggagcac
aagcccaagctaatgaatcttttccctaaaataaagaaaagcataaagcctgagaaagat
ggaagtgaggagaaatcaaagaaaacacgatttcctaatgtctttcctcagagacggccg
agcaggattgacacttcagcaatcagcagggctctggagccgaggcagcgtcagacaaag
cctcagctgccgttgggcgctggagagcaggcagacgggtcgtctcctcccgtacggagc
agtcagtcgagtgaaggctcagatggcaccactgccctggtcacgtcacccccttacagt
gctccagcagcacagggcacagacagcatcaaccgagagtctgaggctggtggacttccc
tcttctgcactacctagactgggagacggtgtcgtcccgggagatctgcaggactcgtcc
tcttcaaacactcactttgacttcagcccctgtacactggagcatctactggaggaggaa
gctgagacagacaagacgcaggacaccggcacccccaggcctgacaggagcaggatggag
ccgctgggctctggagaggtgcagagtgaagatgatcagtgtgctgaggtagagctagag
cctcctaactggcagacgctggtgagcagagacgtcctgtccacacttacccctcaggaa
atcaagagacaggaagtcatcaacgagttgttctacacagagagagcacacgttcgaatg
atgaaggttctggagaatttattttaccagccgctgatccgagaggccatcctccctcct
gcagacatcaaaaacatcttcagcaaccttgaggagatcgttcagcttcacatgtcttta
acagaacaaatgactgcggttcggaagaaaaatgagacggcgctcattgactcaatagga
gatgatttgctttcctggttcagtggagaagaagaggcgaagatcaagagagctgcgggc
acgtactgcagtaatcagcctttcgccctggaactcatcaagagcaaacagaagaaagac
cagcgcttcaactccttcatacaggaggcagagagtaaccgacattgtcgcaggctacag
ttaaaggacattattcctgtggagacacaaagactcacaaagtatcccctcctgctggag
aacatcgccaaatacacaggtacaaacctggacttgactaagaggaagatggtgcatgag
ggaccactgtcctggaaggtcaacaaagataaaactattgagctgtacacattgctgctg
gaggatatattggtgctacttcaaaggcaagatgagaagctgatcttaaaatgccacagt
aagaatctggcgggcactgctgagaccaaacacatcttcagccccatcatcaaactcagc
actgtgatggtgcgctcggtcgccaccgacaacaggtcattctttgtgctctctatgtct
gataatggagcccagatctatgaactaatggctcaaaccgtatctgagcaaaagacgtgg
cagtgcctgatcacacaaagagccgattgtatgaagaccaaactacacaacatcattcca
ttacctcagactgacggggaacgtgaagcggtcgagttaataaactctggtgttcagaaa
ctaaacaaagactctgagcccatttctttagtgagcattcagtctccagaaaaagatgga
accgaggtcatgccaaccccaccatgtagcaccaacccatttgagaccaaatctgatgag
gaggatgaagaagaagaagaggaaaactcactacaggatcaggctgaagatgatgaggcg
ttcgtggtggccgatatgaccgatcgacttacattcctgaagcagcgctcgaggctgggc
atcgccatagacaaggacgaggccgaggccttcgagctccagccactcagagctgatgaa
gctctcagaacactggcaacactaaggcagctcctgatcaaccacatgtccagtcaggag
gacacagacagagacatcaagaggcgagagcaacaggaagatgtggcgaggacaggctct
cagcagggggctgaggacagcactgcgatcaggtccgctgttgagaatggctcagagagg
gctgagaacgcacaggaactgccctccggagacacaggcttctttgagacgtctgaggat
tgtgtctctgcaggcagttacatggtgctggaggtgtatggaggcttgggcgagagcagc
acagatgatgatgtgcagggcagcagcggggagccggtggccgcgggagactcaggtatt
gacttgaagaagctcctctcttcctcctctcagagcagcggaggaccaaacctcaacaga
cagatcatgacacacatacgtctactacaggccaacctgcagcatctgaaggatacagaa
atcaagtataaccagctacgccaaaggctatcagaggaaactgctactgacacagaggaa
aacaaagataaaagttag
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integrated database retrieval system
