Sinocyclocheilus rhinocerous: 107712997
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Entry
107712997 CDS
T04916
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107712997
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107712997
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107712997
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107712997
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107712997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FAM176
Cadherin_4
DUF4139
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
107712997
NCBI-ProteinID:
XP_016373900
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MWNTKRATRLHSKGELWGLFILLLYTSPLSCSSNFSHLIYKIKEGLPKGTLIGAISADLK
LDLSVNPPRSFNLELKTASQQYVNLNNTTGELFTSAVEIDREALCAESHEGQGCAISLDV
LILPQQYFQLVKVKIIIEDVNDNHPHFPVDEIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFLIITEYLDRETQAEYVTDIIAEDGGSPPLLG
TATLRIIITDVNDNCPKFTESQVNVTLYGNATNGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVTVHVIKQLSG
PPVVIPRYIASEKDGVVSINESEPPFSPIALFTIKNTEPQQKIECFLEGTGPFRLVPYER
FKNEYLLETTELLDYEQQQDYEMAVVVRNSRGLVVNTVVKVHVLDVNDNAPVFKQSFIDV
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLIVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGALT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTTLDREQQGKYYVWIEAIDGGEPAL
SCITMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKALSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKEGRKGEQVPNLCGEYQVLLLALTVTCLGLFLTV
LALVAFICCKKRKPKKKRLDSEIPLNLINQETMDKSLMEISNI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaaagagcaacccgccttcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcctctctcctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacactcataggggctatcagtgcggacttaaaa
ttggatctttccgtcaatcctcctcgctcattcaatctggagctaaagacggccagccag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgctgtggagattgac
agagaggctctgtgcgcggagtcccatgagggccagggctgcgcaatctctctggacgtg
ctaatccttcctcaacagtactttcagctggttaaggttaaaatcattatagaggatgtg
aatgacaatcatccgcatttccctgtcgatgaaatcagggtgtctgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtggatcccgacatcgggattcac
agcgttcaaacatactggcttgttaatgactatggtgttttcacattagatgtagaggag
aatgaaggcggtgaactgacgccctttctcatcattaccgagtatcttgatagggagacg
caagctgagtatgtgactgacattatagccgaggacggaggctctccgccgcttctaggc
actgcaactctgaggattatcatcacggatgtcaacgacaactgccccaagtttacagag
tcgcaagtgaacgttactctttacggaaacgctactaacggcatgcaactggctcgtcta
caagcctacgatccagacgagggagccaacgccttgatcacgtataccttcagcgaacgg
gtcacccaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacaccggaaaactctacaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacggttaccgttcacgtcattaaacagctctccggc
cctccggtggttatcccacgttacattgcttctgagaaggacggtgttgtgagtataaat
gagtcagagccaccgttttcacccattgctttgtttaccatcaaaaacactgagccacaa
cagaagatagagtgttttcttgaaggtacaggtccatttaggcttgtaccatatgagcgt
tttaaaaacgagtacctgcttgagaccaccgaactattggattatgagcagcaacaggat
tatgaaatggctgttgtggtacgtaactcacgtggattagtagttaataccgtagtgaag
gtccatgtgttggacgttaacgataatgctccggttttcaagcaatccttcattgacgtc
acagtggaggagaacaacccaccaaatacgttcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggtgaggtgtattacctactcggtgccgacgctcccaccattttt
gacttggatcggtcaaccggggtactgatagtgtccacttctcttgaccgagaggaaaaa
gagacgtaccgattcatggtgcgggccgtagaccggggcacgccgagaaaggagtcaatc
gccactgtgattatcaccgtccaggatcgcaatgacaacagtccgcggttcatcaacaag
gacttcaccttctttgtgccggagaactttccaggttttggggaaattggcgctcttact
gttacggatgcagatgctggggagaacggctgggtggcgttgtccattcttaatgggagc
gacatcttcgtaattgacaccggacgaggagcgctgcgggccaagaccactctggaccgg
gagcaacagggaaagtactacgtttggatcgaggcaattgacggaggcgaacctgctctt
tcttgcatcacaatggtgactgttctcctcctggatgtcaacgacaaccctccaactgtt
cttttcccccagtccaaccagtcgtacatgttagtgcttcccaacacacttccaggaact
tctataacggaggtttacgcggtggaccgggacacggggatgaacgctgttattgcgtac
agcatcatcaagagaacagacggagagccgggctcatttgacattgacccctacacggga
aacatcaccttgaggaaagccttgagcaatcgaggcctctacagtttgtgggtcaaagtc
agggaccacggtcaaccagaactctactctaccgtactggtcaacctgtttgtgaacgag
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctccagataaggaagggaggaagggtgaacaagtgccaaatctgtgtggc
gagtaccaagtgttactgcttgcactgacagttacctgcctgggattgtttctgaccgtt
ttggcgttggtggcgttcatttgctgcaagaaaagaaaaccgaaaaagaagaggttagac
agtgagattcctttaaatctcatcaaccaagaaacgatggacaagagcctaatggagatt
tcaaacatctga
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