Sinocyclocheilus rhinocerous: 107713153
Help
Entry
107713153 CDS
T04916
Name
(RefSeq) transcription factor SOX-30-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107713153
Transcription factors [BR:
srx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107713153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107713153
NCBI-ProteinID:
XP_016374071
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MDKHPKMRAKKRFRNDEPVPKCAKTEENCIWKKPGPPVTIPAVKAQRVSEPTEVNSLTTH
RQDHPQDEGFNSINRSLTEDVGVKQDNADWVTFPLYSSGQTSMVLTTDNAISQGFSVKDT
PQSFNCNLSSEAPFPKINYQPISETYIPIATHQPISAASVINREPISEASVQINTRGLNF
TQPPSGAESEVARSQNKKVSIKRPMNAFILWSKIHRPALSKANPYASNCDISVQLGLEWH
KLSEEQKKPYYEEARRIMAQHMEKYPDWVYQPCRVKKKHSASRRPPVVPATQISTPFILT
WAQRPNPYPEPLTSARGQNSLNYPANINQAMEMQQGFINTDQCPLSAPQCIFSADLHMTG
QQFYPAESIPCSSSSSHLIDFMSHYEDLRHEAPVLNCEYCFHDDN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaccccaaaatgagagctaagaagaggttccgaaacgatgaaccggtacca
aaatgtgccaaaacagaagaaaattgtatttggaagaaacccggtcctcctgtcacgatc
cccgctgtcaaagctcaacgagtcagtgaaccaactgaagttaacagcttgacaactcac
agacaagatcatccacaggatgaaggttttaactcgatcaacaggtcattaacagaagat
gttggggttaaacaggacaacgccgactgggttacatttccactttattcctcaggtcaa
acttcaatggtgctaaccactgataacgcaatttctcagggtttctcagttaaagacacg
ccgcagtcatttaactgcaatttgtccagtgaggcgcctttcccaaaaataaattatcag
ccaatcagcgagacttatattccgatagcaacccatcagccaatcagcgcggcgtctgta
ataaaccgtgagccaatcagcgaggcttctgtgcagatcaatacccgaggtctgaacttc
actcagccgccttctggagcagaaagtgaggtggcaagatctcagaacaaaaaagtttct
atcaaaaggcccatgaatgccttcatcttatggtcaaagatccaccgacccgccttgtct
aaggccaacccatatgccagcaactgcgacatcagtgttcagctagggttagaatggcac
aaactgtctgaagagcagaagaagccatactacgaagaagctcgcagaatcatggcacaa
cacatggagaagtacccagattgggtctatcagccatgcagagtgaaaaagaagcattcc
gcatccagaaggccaccggtcgtccctgcgacccaaatctccacacccttcattctgaca
tgggcacagagacctaacccttacccagagcccctaacatcagcgagagggcagaacagt
ctaaattatccagccaacattaaccaggccatggagatgcaacaaggttttatcaacacg
gatcaatgtcctctctctgctcctcaatgtatcttctctgcagacctccacatgactgga
cagcagttctacccagcagaatccattccatgttcaagctcttctagccatctcattgac
ttcatgagccactatgaagatctgaggcatgaggcgcctgtcctaaattgtgaatattgc
ttccatgatgacaattag
DBGET
integrated database retrieval system
