Sinocyclocheilus rhinocerous: 107713207
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Entry
107713207 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107713207
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107713207
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
Helicases
107713207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
Potyvirid-P3
Motif
Other DBs
NCBI-GeneID:
107713207
NCBI-ProteinID:
XP_016374144
UniProt:
A0A673MFJ1
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MDAFDLFRKLGSGAKFDLKRFGKDAERFKVVKSHSKDSSNQLAGISFFGKETQENTSLES
RLSEDDGEEGSDEEQASGKRKWTEPVKTARKKKKGAKIKTDADAEPEKSEGEGIQWMSSQ
EKVNDPKKESKDKPSLKRLKQLHQEKVNRIRHQNRINVHGTDIPDPISTFEELQKEYDLD
PRIVQNIKAAGFQTPTPIQMQAIPLMMLKREILASAPTGSGKTMAFCLPLLAHLRQPLNK
GFRALIISPTRELATQTHRELLKLSEGVGFRVHMLNKGVEAVKKYGPKTAKKFDILVTTP
NRLIYLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPKIRRVLFS
ATFATDVEQWCKLNLDNLVCVNIGPRNSAAETVEQQLLFVGSENGKLLAMRNLIKQGFLP
PVLVFVQSIGRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALMA
RGIDFKGINLVINYDFPTTAVEYIHRIGRTGRAGHKGKAITFFTEDDKPLLRSIATVIKK
AGCPVPDYMIGLKKIKSKLKRQLATKPPRRSTIRTTPRILFEKKPGKRKRRKRKAEAKAK
GDASEVISNS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgacttgtttagaaagcttgggtctggagcaaagtttgatctgaaaagg
tttggtaaagatgcagagcgatttaaggtagtgaagtctcacagcaaggacagctcaaat
cagctggctggaatcagcttttttggcaaagagacgcaagagaacacgtctctggagtcc
agactaagtgaagatgatggtgaagaagggagtgatgaagagcaggcctctgggaaacgg
aaatggactgagccagtgaagacagcacgaaagaaaaagaaaggagctaagataaaaacc
gatgcagatgcagagcctgagaagagcgagggagaggggatccaatggatgtcatcccaa
gaaaaggtgaacgaccccaagaaggagtctaaagacaagccctccttaaaaagactaaag
cagcttcatcaggagaaggtgaatcggatacggcaccaaaatcggattaacgtgcacggg
acagacattccagatcctatttccacttttgaagagctgcagaaggagtatgatctggac
ccacgaattgttcaaaacatcaaggcagcgggtttccaaacccccacacccatacagatg
caggccattcctctcatgatgcttaaaagggagatcctggcatctgctcctacaggctct
ggtaagactatggccttctgtctgcccctgctggcccaccttcgccagccccttaataag
ggtttcagagccctcatcatctcccccaccagagagctcgccactcagactcacagagag
ttgctcaaactgtcagaaggagtgggcttcagagttcacatgctcaataaaggagttgaa
gctgtgaaaaaatatgggcccaagacagcaaagaaatttgatatattggtgacgactcct
aacagattgatatatttactaaatcaagaccctcctgctatcaacttaagcagtgtggag
tggctggtggtggatgaatctgataagctctttgaggatggcaagactggtttcagagaa
cagcttgccactatcttcttggcctgcagttctcctaaaatccgccgggttctcttcagt
gcaacctttgccacagatgtagagcaatggtgcaaactaaacctagacaacctcgtctgt
gtcaacattggacccaggaactctgcagccgagactgtggagcagcagcttctgtttgtg
ggttcagaaaatggaaagctacttgctatgagaaaccttataaagcagggatttctgccg
ccagtgttggtgtttgttcagtctattggccgtgcccgagagctgttccatgagctggtg
tacgagggaataaacgtcgatgtgatccatgcggatcgcacacaacagcagagggacaat
gttgtgagcagtttccgttcggggaagatctgggtgctgatctgcactgctctcatggcc
cgtggtattgacttcaagggcatcaacctggttatcaactacgacttccctaccactgct
gtggaatacatccaccgcatcggacgaactggaagagcaggacacaaaggaaaggcaata
actttcttcacagaggatgacaaacctctccttcgcagcattgcgactgtcataaagaag
gctggatgtcctgtccctgactacatgatcggtttaaagaaaatcaaaagcaaattgaaa
cggcagcttgcaacaaaaccccccagacggtcaactattcgcacgactccacgcattctc
tttgagaaaaagcccggcaagagaaaaaggagaaaaagaaaagctgaagcaaaagcaaag
ggcgacgcatcagaagtcatttctaacagctga
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