KEGG   Sinocyclocheilus rhinocerous: 107713351
Entry
107713351         CDS       T04916                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107713351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srx03400]
    107713351
DNA repair and recombination proteins [BR:srx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107713351
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 WD_LRWD1 Beta-prop_IP5PC_F WDR54 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 107713351
NCBI-ProteinID: XP_016374320
LinkDB
Position
Unknown
AA seq 595 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSIN
HHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRSPDIRVLICEEKAPVLKM
ELDRSADPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYENDCSAPLTPLCTQTEQLIKGT
AVCMCFSQSVFYRIFTYVNLGGLLLQALLEYWPRTHTNPTDEETELNHGSVNGENESRIQ
KGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPK
FNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDSESQTGGSAAEKP
SEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatacgtg
atcagagacgaggtggagaaatataatcgtaatggagtcaacgcactacagctggatcca
gctcttaaccggctcttcaccgccgggcgagactccatcatcaggatatggagcattaac
catcacaagcaggatccgtacattgcatcgatggagcatcacacagactgggtcaatgac
atcgtcctctgctgcaacgggaaaacattgatatcagcgtcatcagacactacggtgaag
gtctggaacgcacacaagggcttctgcatgtcaacactgcgaacgcataaggactatgtt
aaagcattggcatatgctaaagacaaagagctggtggcttctgcaggactggacagacag
atctttctctgggatgtgaacacactgaccgcgctgaccgcgtccaataacaccgttact
acgtcttctctcagcggaaacaaggactccatctatagtctggccatgaatcagatgggg
acggttatagtgtcaggatccactgaaaaggttctgagagtgtgggacccgcgaacctgt
gccaaactaatgaaactgaaaggacacacggacaacgtcaagtccctgctgctcaacaga
gacgggactcagtgtctctcagggagctcagacgggacgatccggctctggtctctgggt
cagcagaggtgtatcgccacgtaccgcgttcacgacgagggcgtctgggcgctgcaggtc
aacgaggccttcacgcacgtttactccggaggccgcgaccggaagatatactgcacagac
ctgcgcagtcctgacatccgtgtgctgatctgcgaggagaaagctcctgtgctgaagatg
gagttggaccgctcggctgatccgcattcggccatctgggtttccaccacaaagtccacg
gttaataagtggtctctgaagggtatccataatttccgagcgtctggtgattatgagaat
gactgcagcgctccgctgacgccgctgtgcacgcagacagagcagctgatcaaaggtacg
gctgtctgcatgtgcttcagtcagtcagtgttttacaggatcttcacatacgtgaatctg
ggcgggctgctgctgcaggctctgctggagtactggcctcgcactcacaccaaccccacg
gacgaggagaccgaactcaatcatgggagcgtgaacggtgagaacgagagccggatacag
aagggaaacggatatttccaggtgccgccgcacactccggtgattttcggtgaagcggga
ggaaggacgttattcaggctgctgtgtcgagactccggtggagaaactgagtccatgtta
ctcaacgagacggtcccgcagtgggtcatcgacatcaccgtggacaaaaacatgcccaaa
ttcaacaaaatcccgttctacctccagccccattcgtcctccggagcaaaaacattaaag
aaggatcgtttgtcggccagtgacatgttacaggtgaggaaggtgatggagcacgtgtat
gaaaagatcataaacctggacagcgagtcgcagacgggtggttcggccgcagagaaaccc
agcgagcagaaagaggaggaggacatggcagtgctagcggaggagaagatcgagctgctc
tgtcaagaccaggttctggatcccaacatggatctgcggacggtgaagcatttcatctgg
aagagcggcggtgatctgacgctccattatcggcagaaatccacgtga

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