Sinocyclocheilus rhinocerous: 107713474
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Entry
107713474 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107713474
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107713474
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107713474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Sina_ZnF
zf-TRAF
TRAF2_zf
Motif
Other DBs
NCBI-GeneID:
107713474
NCBI-ProteinID:
XP_016374475
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MAAIQELHRKMAATQESLHKMVALLESHHVSADLTEFRHDMATISEPHPIMATISDCPVK
CQRISTKELNHVLPLKNLILKLDIKCDNHARGCEKIVKLQHLAEHAEMCDYSPAKCRNKG
CSEVLNLKDMDAHMRESCDYRAVGICESGCGLMLTHKEQKLDNHCCLKALKAHNGALQGK
VVSLDKELKKQALKSTKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLSKSLSP
PCKGGETKSVTAILHRESGSLGFNIVGGRPCADNKDGTSNEGIFVSKIVENGPADKEGGL
QIHDRIMEVNGKDLSKATHDQAVEAFRMAKEPIMVQVLRRAPRPKPTGPSGEAQVVDIST
QTDITFQHILALSKLPTSSPPVDVLEQYLLPEGHSPAHEYFDPNDFLEGMQHEIEREELE
YEEVDLYRTNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGI
EIQNREEAVALLTSEEHPNVCLLLARPEIQLDEGWMDDDRNDYLDDLHMDMLEQQHHQAM
QFTASMLQQKKHEEDGGTTDTATLLSHHHEKDSGVGRTDDSTRNDESSEQENLADDQTSA
STTLGSRRRLAYSQDTLGSGDLPFSSESFISADYADADFLGDFPADECEQFRELLELKCQ
MRSAGSSGTPEQSLFWPSGGVGGGQGSVGEEGIDKELELLNEELRSIELECLSIVRAHRM
QQLREQCREQSWMLHNSGFHNYNTSVDARRHELADISELPEKSDKDSSSAYNTGESCRST
PLTLELSPDNSLRRGNENQAEAGASSGTSGASRILKPLLSPVQEACSPNRSRPTLSKESE
VGTQPEIHERKAGRNAQPQSPYKHAHIPAHAQHYQSYMQLIQQKSVEYAQSQMSLVSMCR
DPVASADLGPKMEWKVKIRSDGTRYITKRPVRDKLLKERALRIREERSGMTTDDDAVSEM
KMGRYWSKEERKQHAVRAKEQRQRREFMKQSRMDCLKEQVGSAEDKKEVNIIELSHKKMM
KKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggccgccattcaagagcttcatcgcaagatggctgccacacaagagtctctccacaaa
atggtcgcccttctagagtctcatcacgtctcagctgatcttacagagtttcgtcacgac
atggccaccatttcagagcctcatcccatcatggccaccatttcagactgcccggtcaaa
tgccaaaggatctccaccaaagagctcaaccacgtcctccctctgaaaaacttgatatta
aagttagacattaaatgtgacaatcacgcgcggggctgcgagaagatcgtcaaactccag
catctggcggagcacgcggagatgtgcgattattcccctgccaaatgtaggaataagggc
tgcagcgaagtgctcaaccttaaagatatggatgctcacatgcgtgaatcgtgtgattac
agagcggtcgggatatgcgagagtggatgcggattgatgctcactcataaggagcagaag
ttggacaaccactgctgtttgaaagccctcaaagcgcacaacggcgcgctgcaagggaaa
gttgtcagcttggataaggagctgaagaaacaagctctcaaatcgactaaaagagagaaa
tcgcttttggctcaactgtcggcggttcacaacgagcttcagatgacagcgctgaagtat
cagaagaaattcactgaatacagcgccaggattgactcgctgtccaagagcctctctcca
ccgtgtaagggtggagagaccaaaagtgtcacagctatactccatcgtgagtctggatct
ttaggcttcaatatcgttgggggacgaccatgtgcggataataaagatggcacttcgaat
gaaggaatctttgtgtcgaagattgtggaaaatggaccggcggataaagaaggaggtttg
cagatccatgacaggataatggaggtcaatggaaaggacttgtcaaaggcaacgcatgac
caggctgtggaggccttccgtatggctaaagagcccattatggtccaggtgctacgccgg
gctcccaggcccaaacctacgggccctagtggggaagcacaggtagtggacatcagcacc
cagacggacatcaccttccagcatatcttggccctcagcaagctgcctacgtcctccccg
cctgtggatgtgcttgagcagtacctgctgccagagggacactctcctgctcatgaatac
ttcgaccccaatgatttcctagagggcatgcagcatgagatagaaagagaagagctggaa
tatgaggaagtggatttatacagaactaatatccaggataaactggggttaactgtgtgc
tacaggaccgatgatgaagatgagactgggatctatgtcagtgagattgatccgaacagc
attgctgcaaaagatggacgaattcgagagggagatcgaatcatccagatcaatggcatt
gagattcagaaccgtgaggaagcagtggctcttttaaccagtgaagaacacccaaatgtg
tgcctgctattggctcgaccagagatacagctggatgaaggctggatggatgatgacaga
aacgactacctggatgacctccacatggatatgttagagcaacaacaccatcaggctatg
cagttcacagcaagcatgctccagcagaagaagcatgaggaggatggaggtacaacagac
actgctacgctgctctcccaccaccatgagaaggacagtggagtgggccgcacagacgac
agcactcgtaacgatgagagctctgagcaggagaatcttgcagatgaccagaccagcgcc
tccaccacactaggcagccggcgcaggctcgcctacagtcaggacaccctaggcagtggt
gacctccctttcagcagcgagtccttcatttctgcagactatgcggacgcggatttcttg
ggtgactttcctgctgatgaatgcgagcagtttcgtgagcttttggagctcaagtgccag
atgcggagcgcgggcagcagtggtaccccagagcagagcttgttctggccaagtggtggc
gtaggtggcggacagggcagcgttggcgaggagggcatcgacaaagagctggagcttctg
aatgaggagctccgcagcattgagctcgagtgcctgagcatagtccgagcacatcgcatg
cagcagttgcgtgagcagtgccgcgaacagtcctggatgctccacaacagcggcttccac
aattacaacacaagtgtggatgcaagacgccatgagctagcggacatcagcgaactccca
gaaaagtcagacaaggacagctccagcgcatacaacactggtgaaagttgtcgtagcacg
ccgctcacgctagagctctccccagacaactctttgcgacgtggaaatgaaaatcaggcg
gaagcaggggccagtagtggtacctcgggtgccagcagaattctcaaacctctgctgtcg
cccgtccaagaggcttgcagccctaacagaagtcgtccgaccttgtcaaaagagtccgag
gttggaacacagcctgaaatacatgaacgcaaagcgggtcgcaatgcccagccccagtcg
ccctacaaacatgcccacatcccggcccatgcccagcactaccagagctacatgcaactg
atccagcaaaagtcggtggagtatgcccaaagtcaaatgagcctagtcagcatgtgcagg
gaccccgtcgcttctgctgacttgggacccaaaatggaatggaaagtgaagatccgcagt
gacggtacgcgctacattaccaagcggcctgtccgggacaagcttctgaaagagcgagcc
ctacggatccgagaggagcgcagcgggatgactacagacgacgatgccgtcagcgagatg
aagatgggccgctactggagcaaagaggagcgcaagcaacacgccgtccgtgccaaagaa
cagcgtcagcgcagggaatttatgaagcagagccgtatggactgtctgaaggagcaagtg
ggcagcgctgaagacaagaaggaggtcaatatcattgaactgagtcacaaaaagatgatg
aagaagcggaacaagaaaatctttgacaactggatgactatccaggaactgttaacccat
ggaacaaagtcccccgatgggacacgagtgtacaactccctgctgtcagtgaccacggtg
tag
DBGET
integrated database retrieval system
