Sinocyclocheilus rhinocerous: 107713597
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Entry
107713597 CDS
T04916
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04080
Neuroactive ligand-receptor interaction
srx04082
Neuroactive ligand signaling
srx04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107713597
04082 Neuroactive ligand signaling
107713597
04519 Cadherin signaling
107713597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107713597
Ion channels [BR:
srx04040
]
Ligand-gated channels
GABA-A
107713597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
107713597
NCBI-ProteinID:
XP_016374638
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MAWIRTCFFLSCVGQVFANPPTETRIYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTD
IFVTSFGPVSDVEMEYTMDVFFRQTWMDDRLKFEGPIEILRLNNLMVSKIWTPDTFFRNG
KRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPM
SEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSSTGEYIVMTVYFHLQRKMG
FFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFSTLQANKELRRANMACAAARSDGEVVTNPLDPGG
VLKKRLNSLSQRDAPDRFSRAPQPDLHQQGSTVPANNMLATSIIDKYSRILFPLSFGAFN
LVYWIVYLTKDTMESREV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatacgcacatgttttttcctctcttgtgttggtcaggtgtttgcaaatccg
ccaaccgagacgaggatatatttggataacattacgcgcattttggacagattattagat
ggatatgacaacagactgcgacctggatttggagggcctgtcacagaggttaaaacggac
atctttgtcaccagctttggtccagtttctgatgtggaaatggaatacacaatggatgtg
ttttttcggcaaacgtggatggacgaccgactgaaatttgagggccccattgagatcctg
cgtctcaacaacctaatggtcagcaagatctggacaccggacactttcttccgaaatggc
aaacgttctatttcgcacaacatgaccactcccaacaagctgttccgcatcatgcagaac
ggaactattctgtacaccatgaggttaaccatcaatgctgagtgtcccatgcggctgatc
aattttccaatggatggacattcatgtcctttgaaatttggcagctatgcctacccaatg
agtgagattgtttacacatggaagaaagggccgttattttcagtggaggttcctcaggag
agttccagtctgctacagtatgatctcattggacagacggtgtctagtgagaggctgaag
tcaagcacaggtgaatacatagtcatgacggtgtacttccacctgcagaggaaaatgggt
ttcttcttgatccagacatacatcccgtgcattatgactgtgatcctagcacaggtctcc
ttctggatcgacaaggagtcagtaccggccagaactgtgtttggcatcaccacagtacta
accatgaccacgctgagcattagcgctcgtcactcgttacccaaggtctcctatgccacc
gccatggactggttcatcgccgtctgcttcgcgttcgtcttctcagcccttatcgagttc
gctgctgtcaactatttctccaccttgcaggccaataaggaacttcgtcgcgccaacatg
gcctgtgctgcggccagaagtgatggagaagttgttacgaatcctctggaccctggaggt
gtgctgaagaaaaggctgaactctctctctcaaagagatgctcctgacaggttctccaga
gcaccacagcctgatctccatcagcaaggctccactgtccctgccaacaacatgctggca
actagtattattgacaaatactcacgcatcctttttcctctgtcctttggggccttcaac
ctggtctactggattgtctatctcaccaaagacaccatggagtccagggaagtgtaa
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