Sinocyclocheilus rhinocerous: 107713881
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Entry
107713881 CDS
T04916
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03030
DNA replication
srx03410
Base excision repair
srx03420
Nucleotide excision repair
srx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107713881 (rfc4)
03410 Base excision repair
107713881 (rfc4)
03420 Nucleotide excision repair
107713881 (rfc4)
03430 Mismatch repair
107713881 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107713881 (rfc4)
03036 Chromosome and associated proteins [BR:
srx03036
]
107713881 (rfc4)
03400 DNA repair and recombination proteins [BR:
srx03400
]
107713881 (rfc4)
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107713881 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
107713881 (rfc4)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107713881 (rfc4)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107713881 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
107713881 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
SLFN-g3_helicase
AAA_14
DUF815
Mg_chelatase
AAA_5
AAA_24
RuvB_N
Kinesin
AAA_28
AAA_19
ResIII
AAA_7
bpMoxR
AAA_3
Motif
Other DBs
NCBI-GeneID:
107713881
NCBI-ProteinID:
XP_016375012
UniProt:
A0A673JWX6
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MQAFLKGSSSQSVKAQKASSSSSSSAGEKKQKAVPWVEKYRPKCVDEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVK
RFAQLTAAGTRLDGKPCPPFKIIILDEADSMTGAAQAALRRTMEKESRTTRFCLICNYVS
RIIEPLTSRCSKFRFKPLANDIQQERLLQICGKESLKYTTEGIEALVSVSEGDLRKAITY
LQSAARLHAEQEITEQIIIEIAGVVPPKVIETLLQISYRGTFEKLELAVKDMIDEGYAAT
NVLNQLHDVIIDEKLSDKQKSVITQKMAEVDKCLADGADEYLQLLSLCSVIMQQATHST
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaagggtcttcgtcacagagtgttaaagctcagaaagcatcctca
tcctcctcttcatcagctggagagaagaagcagaaggccgtgccctgggtggagaaatac
aggccgaagtgtgtggatgaagtggccttccaggaggaggtggtggcggtgctgaagaag
tctctagagggcgctgatctgcccaacctgctgttttatggccctcctggaaccggaaag
acgtccaccatcctagcggccgccagagagctttatggaccggagctgtaccgtcagaga
gtcctggagctgaatgcgtctgatgaacgagggatacaggtggtccgagagaaggtgaag
agattcgcccagctgactgcagccggaacacgcctcgacgggaagccctgtcctccgttt
aagatcatcatcctggacgaggcggactccatgaccggcgcggctcaggcggctctcaga
cgcaccatggagaaagagtctcgaaccacgcgcttctgcctcatctgcaactacgtcagc
cggatcattgagccgctgacctccagatgctccaagttccgcttcaaaccgctggccaat
gacattcagcaggagcgtctgctgcagatctgcgggaaggagagcctcaagtacaccaca
gagggcatcgaggctctggtgagcgtgtcggagggagatctcaggaaagccataacttat
ctccagagcgccgccagactccacgccgagcaagagatcactgagcagatcatcatcgag
atcgctggggtggttccacccaaagtgatcgagacgctcctccagatctcttacagaggc
acgtttgagaagctggagctcgctgtgaaggacatgatcgatgagggatacgccgccacc
aacgtcctcaaccagttacacgacgtcatcatcgacgagaagctgagcgataaacagaaa
tccgtcatcacacagaagatggctgaggtggataagtgtctggcagacggcgcagatgag
tatctgcagttactgagtctctgctccgtcatcatgcagcaggccacacacagcacctga
DBGET
integrated database retrieval system
