Sinocyclocheilus rhinocerous: 107714379
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Entry
107714379 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107714379
03009 Ribosome biogenesis [BR:
srx03009
]
107714379
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107714379
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107714379
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
Helicases
107714379
Pre-60S particles
107714379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_11
AAA_22
Motif
Other DBs
NCBI-GeneID:
107714379
NCBI-ProteinID:
XP_016375690
UniProt:
A0A673HLW5
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MKCAACVCDLAEVKAVLEESEVTSDSAPNVTEEQQHSVSTEENETSQKIKKKKRKLDGTG
DSTSSVKKVKKQDEVKETTEEEQQRDEKQEEECEEVLENGNDDKEGSAEEDDSDEDGPQL
PSGLTGAFEDKSFASLAEVVSENTLKGVKEMDFETMTEIQHKTIRPLLEGRDVLAAAKTG
SGKTLAFLIPAIELIYKLKFMPRNGTGVVILSPTRELAMQTYGVLKELMTHHVHTYGLIM
GGSNRSAEAQKLANGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEE
LKQIIKLLPKKRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVV
CPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTT
TFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHA
LLILRPEELGFLRFLKQAKVPLSEFEFSWAKISDIQSQLEKLIEKNYYLHKSAQEAYKSY
VRAYDSHSLKQIYNVETLDLPKVAMSFGFKVPPFVDLNVHSSKGVKMQKRGGGGGFGYQK
SKNVHKAKIFKHVSKRKGDGRQFSR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgctgcatgtgtttgcgatctggcagaggtgaaggctgtgctggaggaatct
gaagtaaccagtgattctgctccaaacgtcactgaagagcagcagcatagcgtctccacg
gaggagaacgaaacctcacagaaaatcaagaaaaagaaaagaaaattggatggcacaggg
gactcaacatctagtgtgaaaaaggtcaaaaagcaggatgaagttaaagagacaacagaa
gaagagcaacagagggatgaaaaacaggaggaggaatgtgaagaggtgctagagaatgga
aatgatgacaaagagggttcagctgaggaggatgatagtgatgaagatggaccgcagctt
ccttctggtctgaccggtgcatttgaggacaagtcatttgcatctttggcagaagtggtt
agtgagaatacactgaagggagtgaaggaaatggattttgaaaccatgactgagatccag
cacaagaccatacgacctctgctggaaggaagagacgtgttggctgcagctaaaacagga
agcggtaaaactctagctttcctgattcctgccatagagcttatctacaaactcaaattt
atgcccagaaatgggactggagtggtcattttgtctcccactcgtgagttggccatgcag
acgtatggtgtgctgaaggagctgatgactcatcatgtgcacacgtacggcctcatcatg
ggcggcagcaaccgttctgctgaagcccagaaactcgccaatggagtcaatatcctggtt
gctacacctggcagacttctcgatcacctgcagaacacacccgggttcatgtttaagaac
cttcagtgtctgatcattgacgaggctgacaggattctggaggttggctttgaggaagaa
ctgaagcagatcatcaaacttttgcctaaaaaaagacagaccatgttattttccgcaaca
cagacacgtaaggtggaggatcttgcacgaatctctctcaagaaggagccgctgtatgtg
ggggtggatgacaacaaagacacggccaccgtggaaggactagaacagggatatgttgta
tgtccttcggaaaaacgcttcctgctgctcttcacgtttctgaagaagaaccgtaagaag
aagctgatggtgttcttctcgtcttgcatgtctgtgaagtaccactatgagctgctcaat
tacatcgatctgcccgtcatggccattcacgggaagcagaaacagacgaagagaactaca
acgtttttccagttctgtaacgcagactctggcattctcctctgtacggatgtggctgcc
agaggtctcgatatcccagaagtggactggattgttcagtacgacccacccgatgatcca
aaggagtacatccaccgtgtgggacgaacagctcgtggtattaatggtagaggacatgcc
ctcctgatcctaagaccagaggagctcggctttttacgattcctcaaacaggccaaagtc
cctctgagtgagtttgagttctcctgggctaaaatctctgatattcaatctcagttggag
aagctgatagagaagaactactaccttcacaaatcggctcaggaggcctacaaatcctac
gtcagagcttacgactctcattccctcaaacaaatctataatgtagagacgctagacctc
ccgaaagtggcaatgtcctttgggtttaaagtgccgccttttgtggacctcaacgttcac
agcagtaaaggggtgaagatgcagaagcgaggtggtggtggaggctttggctaccagaaa
tctaagaatgtccacaaggccaagatcttcaaacatgtcagcaaaaggaaaggagacggc
agacagttctcacgctga
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