Sinocyclocheilus rhinocerous: 107714436
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Entry
107714436 CDS
T04916
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107714436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107714436
Transporters [BR:
srx02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107714436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107714436
NCBI-ProteinID:
XP_016375755
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MKKIKGQIEERGSWGSKTEFILAVAGIVIGLGNVWRFPYLCYKNGGGAFLIPYLVFVVTC
GVPLFLLETAMGQYTQEGGITCWRRLCPLAEGIGYAGQLIILYSCMYYIIILAWALFYFI
FSFSSQLPWDSCDNTWNTADCVNLAANNLTLNRTMLINSTTSVTEFWRNRVLVLSDGIEQ
VGKINWEILLCLIAMWIICYFCIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQ
GIVFYLYPEPARLFDPQVWMEAGAQIFFSYALGTASLTVLGSYNKYNNNCYRLVQYYCII
SSIFVFGIYFKEFDGGMYVFQLFDYYACSGACLLFLCVFESLAMGWIFGAERMFDVIEDM
TNSRPNYIFMLCWKYLTPLVSLVSFVCSLVKYKPLTFNRWYVYPDWAYALGWLLALSSIL
LVPAWALGQLIVVKGSLKQRWRHLCSPDKNLPVTCKQQTEIQENTLITEMEVLVKCDTN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaaaggacaaatagaggagagaggatcctgggggagtaaaacagagttt
attttagctgtggcagggattgtgattggtctgggtaatgtgtggagatttccctatctc
tgctacaagaatggaggaggggcgttcctgataccctacctggtgtttgtggttacctgt
ggggtgcctctgttcctgctagagacggctatgggacagtacacacaggaagggggcatt
acttgttggcgtcggctttgtccactggctgagggtattgggtatgcaggacaactgatt
attttgtacagctgcatgtattacatcatcattctggcctgggcgcttttctacttcatc
ttctcttttagctcccaactgccgtgggacagttgtgacaatacctggaacacagctgac
tgtgtgaatcttgctgcaaacaatctgacccttaaccggaccatgctgattaattcaact
acttcggttactgagttctggagaaacagagtgctggttctttctgatggtattgagcag
gtcggtaagatcaactgggagattctactgtgtcttattgcaatgtggatcatatgttat
ttctgcatctggaaaggagtcaaatccacaggcaaggtggtgtatttcacagctacattt
ccttatgtgatgctgctggtgttgctaattcgtgggttgactcttcctggagctctgcag
gggattgtgttttacctgtaccctgaaccggcccgtctctttgacccgcaggtttggatg
gaagcaggagctcagatctttttctcctatgctttgggtacagcctctcttactgtatta
ggcagctacaataaatataacaacaactgctacaggttagttcagtattattgtattatt
tccagtatctttgtttttggtatctatttcaaagagttcgatggggggatgtatgtattc
cagttgtttgactactatgcctgcagtggagcctgtcttcttttcctctgtgtgtttgag
tctctggccatgggttggatctttggggctgagagaatgtttgatgtcattgaagacatg
accaactcacgacccaattacatattcatgctgtgctggaaatacctgactcctctcgtg
tctctggtgtcttttgtctgttctcttgtgaagtacaaacccctcacttttaaccgctgg
tatgtgtacccggactgggcgtatgcactaggctggttactggccctgtcatccattcta
ctggtgcctgcatgggcgcttgggcaactgattgttgtaaaaggaagcttaaaacagcgt
tggcgtcacctgtgtagtcctgacaaaaacctccctgtcacctgtaagcaacaaacagaa
atacaagaaaataccctaatcacagagatggaagtcttagtcaagtgcgacacaaactaa
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