Sinocyclocheilus rhinocerous: 107715059
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Entry
107715059 CDS
T04916
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107715059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
srx04091
]
107715059
Lectins [BR:
srx04091
]
C-Type lectins
Lecticans
107715059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
ATP11
Frem_N
Motif
Other DBs
NCBI-GeneID:
107715059
NCBI-ProteinID:
XP_016376586
LinkDB
All DBs
Position
Unknown
AA seq
1963 aa
AA seq
DB search
MGVNIFALTVFTLSHLWPHVQASSVVRLNTGLRVARGQSVFVTAGELQFHTDGVSEACKV
EVVLTEPITQRVGKLTPQVFDCQFFPDEVKYVHNGSPLLKEDTVMLRVYRFTETETFVET
VLLKVHVVEPQRSLTELGNVPLVVSEFYSLSNAINSSVLTFKNQPEVICTVRLVSSEINI
PMLGQLVTEDPESMPASEPGPRKGRHTGITCPGNKACDHNTREVEFLKTDCAEFLTSGLR
YQHLSPPSPEIDYIPIRVEFRDQTSRAMLETESIWIPVLIQGAMQNQPPSAAFMSTFILE
VDQFILTPMTTAALDAKDDETPQARLIFNVTKPPAEGYITHLDDHTKTAFSFSWQDLNEM
KIAYQPPNSSHTARRNYEVEFQAIDGSFVPSHPILMHISIRTAETNAPRVSWNMGLDLLE
GQSRPITWEHLQVVDNDNIRHKFPIYILPKDDTPPFLINNVAFEVQEGGTVRVEEYMLMA
SDLDSSNDYIQYQLITFPRAGQLVKKSSPHEPGVPVKSFLQRDLFQGLIYYKHSGEEVFE
DSFDFILSDVQQPPNLSDRHTVVIHVFPVKDQLPEEVSGTVRSITVKETEVVYITQSHLH
FRDTEHSDTDLMYVIIHPCFNPRNTRLSDAGRLFYTDSTNSMKKDAMVPVLKSFTQHAVN
HHKVAYMPPIEDIGPEPLFVQFVFSVSDQQGGALTGLTFNITVIPVDNQAPEMFTNLLRV
EEAGGSFLMEEHLLVQDVDSSEDQLRVHMKTQPQHGRLELQGTAMLEGDSFSLQDLKALR
VRYIHDDSETLKDSIGLTITDGINSAYGTLLVQILPVNDEPPQLGSDLRAELSCKEGGQV
HITVEYLSATDVDSEDTRLTYMLARTPARGVLQRNGVTVDKFSQLDMLNGLIFYLHTGGE
IGPDPVSDTVTLIVSDGEAGTIDGCCQEDALPPPVPLHGTLPVYDLNITVMPVNNQVPTI
TLGNMFVVDEGASACLCGGVLEAYDPDSHPDQLMFHLVTPPKYGFLENTLPSPGFEKSNA
GLRVVSFSQLHLSSGFINYVQSVHKGVEPTADFFTITVSDGIQRSAPLPFYIIINPTNDE
IPSLLLSNFTVMEGGMKDLSPDILNAVDGDIPADTLTMTILVPPAHGTLVNGIYGLKMNR
YKNMNPEVLQRTLAIQSFTLQELQQGMKIMYMHDDTETLKDAFTIQLTDGGHTVQGTACV
RIIPVNDEKPWLLKNAGIEVEALEKRVISSAVLEAGDHDTPNDHLLYILNAGPRFGLLQL
RTEAGWIDLSPGQNFTQEDVEMNRLWYTHTTVSGLKGHDRFHFVLSDGENTTPPRSFFIS
VRTVPKGEIALITKPVILMEGERVILTTDILMATDSGSEPDELLYTVSVPPEHGHLHMVQ
SPGVPVLSFSQMDVAANRVCYTHDNSRFADRDSFSFAVTNGVTSRSGTIHFTVEHSDRIP
PNLTINKGLELTEGSMKTISTDDLKLTDPDTALENLTYIVIQSPQYGKLLLKRLPISKPR
FTQLDINNMDLAYHHLNGRAKIDRFTFQPIDGTNTGYLEYGQLKREPAVFTIQIEILDKI
PPSVINKGIPSTVENLLNGKQGIYITSKELRASDPDSPDDTLEFTITRPPHFGYLENALT
GAYIKGRFTQKDLEQKAVRYVIPADIEVTADSFEFQVTDPAGNTMLPEVMEFRWSRVELS
ASCYRVCENAGALAVQVVRSGISSMAHLSEVDKRNQERVWRFIREKIRKLRRSKPQEYKV
RLEKRSEVKTEPLGRSRQAEFVKYMEKELDKRGKAGAGGFTKDKTLGSILNLDMVQEKSG
SEIVELWMQYFSKKDTISAVIPGSTFDIVFGRAKSCPMFLYALPQKEGYEFFVGQWAGHE
LHFTSLINVQTMGENAPSQLILYHYTDLQKDKGIVLMTAEMDSKFVTVHQAQCLANQVQL
FYGSQLETFRLVEIFNHQPAEFKHMSVIAELEQSDIGPAVTIK
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaacatctttgctttgacagtgttcaccttgagtcacctgtggccacatgtc
caagcttcaagtgtagttcggttaaacacagggcttcgggtagccagaggccagtcagta
tttgtcacagctggtgaacttcagttccacacggatggggtatctgaggcctgtaaagtt
gaagtagtgctcactgaacccatcacacaaagagtggggaaactcactcctcaggttttt
gactgccagttctttccggatgaggtgaagtatgttcacaatggcagcccacttctaaaa
gaggacactgtcatgctgagggtctacaggtttacagaaaccgagacttttgttgagact
gtgctgctaaaggttcatgtggtggaacctcaaaggagcctcacagagcttggaaatgtt
cctctagtggtttctgagttctacagcctttccaatgccatcaatagcagtgtccttacc
tttaaaaaccagcccgaagtgatctgcactgtacgtcttgtcagctctgagatcaacatc
ccaatgcttggtcaactggtcactgaggatcctgaatcaatgccggcttctgagcctgga
ccgagaaaaggacgtcatactggaatcacctgcccaggaaataaagcctgtgaccacaac
acaagagaagtagagttcttgaagaccgactgcgccgagttcctcacttcaggtctgagg
taccagcacctcagtcctccatcacctgagattgattatatcccaatcagggtggagttt
agggaccagacctcccgagccatgctggagactgagagtatctggatacctgtactgatc
cagggggccatgcagaaccaaccccccagtgctgccttcatgtctacattcatcctggag
gtagatcagttcatcctcacacccatgaccactgctgccctggatgcaaaagatgacgag
acccctcaggcccggctgatcttcaatgtgaccaaacctccagcggagggatatataact
catttggatgatcacaccaaaactgcattctccttctcatggcaagacctgaatgagatg
aaaattgcctatcagcccccaaacagcagtcacacagccaggaggaactatgaggtggag
tttcaggccatcgatggctcatttgtgccgagtcatcctatcttaatgcacatctctatc
cgcactgcagagaccaatgctcctcgagtctcatggaacatggggttggatctgctggaa
ggccaatccagaccaatcacatgggagcacctacaggttgttgataacgacaacatcaga
cacaaattccccatctacattcttccaaaagatgacacccctccttttctaatcaataac
gtggcctttgaggttcaggaaggtggcacagttagggtggaggagtacatgctgatggcc
tcagacttggactccagcaacgactatattcaatatcagctgattacttttcccagagca
ggacagctggttaagaagtcctctccacatgaaccaggagtcccagtgaagagcttcttg
cagagggacctgtttcaaggtctaatttactacaagcactcaggggaggaagtgtttgag
gactcgtttgatttcatcctctcagatgtccaacagcctccgaatctatcggacagacat
actgtggtgatccatgtgtttccagtgaaggaccagttgcctgaggaagtttccggaaca
gttcgctccatcacggtgaaggaaaccgaggttgtttacatcactcagagccatctgcac
ttcagagatacagagcattcagatactgaccttatgtatgtgatcattcatccctgcttt
aacccgagaaataccaggttatcagatgcaggcaggctgttttatactgacagcacaaac
tccatgaaaaaagatgcaatggttccagtgcttaagtcctttactcagcatgcagtgaat
caccacaaagtggcttacatgcctccaatagaggatattggccctgaacctctctttgtg
cagtttgtgttttctgtgagtgaccagcagggtggcgctctcacaggtctcaccttcaac
atcacagtcatacctgttgacaaccaggccccagaaatgttcactaacttgttgagggtc
gaggaagctggtggtagtttcttgatggaggagcacctgctggtgcaggatgtggacagc
tcagaagatcagctcagggttcacatgaagactcagccccaacatggaagactggagctg
cagggcacagcaatgctagagggagacagcttcagtttgcaggacctaaaagcattgagg
gtcagatacattcatgatgactctgagaccctgaaggatagcattggtcttactatcaca
gatggaatcaactctgcatatggaacgcttttagttcagatcctgcctgtgaacgacgaa
cccccacagttaggctccgacttgagggctgaactgtcctgcaaagaggggggtcaggtc
catattacggttgagtatctctctgctacagatgttgacagcgaggacactcggctaaca
tacatgcttgccagaacacctgcacgtggggtgctgcagcgaaacggggtcaccgtggac
aagttctcccagctggacatgctaaatgggctcatcttctacctacacacaggtggtgag
attggaccagatcctgtctcagacactgtcactctcattgtgtcagatggagaggctgga
acaatagatggctgctgccaggaggatgctctccccccacccgtccccctgcatggcacg
cttccggtctatgacctcaacatcactgtgatgcccgtcaacaaccaggtcccaaccata
acgctgggtaacatgtttgtggtagatgagggtgccagtgcatgtctgtgtgggggggtt
ttggaggcatatgatcctgatagtcatccagaccagctcatgtttcacttggtgacccca
ccaaaatatgggttcctggagaacacccttccatcccctggctttgagaaaagcaatgct
ggactccgagtggtttctttcagccagctccacctcagttcgggtttcatcaactatgtc
cagtcagtgcacaagggtgtagagcctacagcagacttctttaccatcactgtcagtgat
gggattcagagatcagcaccattgccattctacatcatcatcaaccctaccaatgatgag
atcccatcattgctgcttagcaacttcacagtcatggagggagggatgaaagacctcagt
cctgatattctaaatgcagtggatggtgatattccagcagatactcttaccatgaccatc
ctggttcccccagcccatggcacactggtcaatggcatatatggtctcaagatgaatcgc
tacaaaaacatgaaccccgaggtcctccaacgaaccttagcaatccagtctttcacctta
caggagctacaacaaggaatgaagattatgtatatgcacgacgacacagaaaccctcaag
gacgctttcaccatacagttgacagatggtgggcacacagtccaggggactgcgtgtgtc
cgcatcataccagtcaatgatgaaaagccatggctactaaaaaatgcaggcattgaggtt
gaggccctggagaagagagtcatctccagtgcagtgttggaggcaggggatcatgacact
cccaacgaccatcttctctacatcctcaatgcaggtcccagatttggcctacttcagctc
aggacagaagctggatggattgacctgagtccaggtcagaatttcacccaggaggatgtg
gagatgaatcgcctatggtacactcacactacagttagtggtttgaaaggccatgacagg
tttcactttgttctcagtgatggagaaaacacaacacctccacggagtttcttcatctct
gtccgcactgttccaaagggtgaaatcgctctaatcactaaacctgtgatcttgatggag
ggagagcgagtcattctgaccactgacattctgatggccacagacagtggaagcgagcca
gatgagctcttatacactgtatcagtcccacctgaacatggtcacctacacatggtccaa
agtccaggggttccagtgctttccttctcccagatggatgtggctgctaaccgggtatgc
tacactcatgacaacagccgttttgctgaccgtgattctttcagctttgccgttaccaac
ggtgtaacgtccagaagcggtaccattcatttcactgtggaacacagtgaccgtatacca
ccaaacctgactatcaacaaaggcctggagctcacagagggctctatgaagaccatttcc
actgatgacctgaaactgactgatccagacacagctctggagaatctcacctacatcgtt
attcaaagcccacaatatggaaagttgctcttgaaaagattacccatctctaagcctcgt
ttcacacaactggacatcaacaacatggatctagcttaccatcatctgaatggacgggcc
aagatcgacaggttcacctttcagcctattgatggaactaacacaggttatctagagtac
ggacagctgaagagagaacctgctgtttttaccatacagatagagatattggacaagatt
ccacccagtgttataaacaaagggattccaagtactgtggagaatcttctgaatggcaaa
cagggcatctatatcacctccaaagagctgcgcgcctcagatccagacagtcctgacgac
acactggagttcaccatcacaaggcctccacacttcggttaccttgaaaatgccctcaca
ggtgcctatatcaaaggacgctttacccagaaggatctggagcagaaagcagtgcgctat
gtcatacctgcagatatagaagtgacagcggacagctttgagttccaagtcacagatcct
gcaggaaacaccatgctgcctgaagtgatggagttcaggtggtctcgcgtggagctgtca
gcttcctgttatcgtgtttgtgagaatgcaggagctctagctgtgcaggtggtgcgcagt
gggatatctagtatggcacatctgtcagaggtggacaagagaaatcaagaaagagtttgg
agatttattagagagaagatcaggaaactgcggaggtcaaaacctcaagaatataaagtc
cggctggagaagcgcagtgaggtgaagacggagccgctcggacggtccagacaagcagaa
ttcgtgaagtacatggagaaagagctggacaaacgtggtaaagcaggagctgggggcttc
accaaagataagacattagggtctattctcaaccttgatatggttcaggagaaatctgga
tctgaaattgtagagctgtggatgcagtacttctcaaagaaagacacaatcagtgccgtc
ataccaggctcaacatttgatattgtttttggtcgtgccaaatcttgcccaatgtttctg
tacgctctgccccagaaggagggctatgagttttttgtcggccagtgggcaggtcatgaa
ctgcacttcacatctttaatcaatgttcagacaatgggagaaaacgcacccagccagctt
attttataccactatacagacctgcagaaggacaaaggcatcgtgctgatgactgctgag
atggatagtaaatttgtgactgtccaccaggcacagtgcttggccaatcaggtgcagctg
ttttatggatcgcagcttgagactttccgattggtcgagatcttcaaccaccaaccggca
gagtttaaacacatgtctgtgatagcagaactcgaacaaagtgatattggaccagcagtc
actataaaataa
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integrated database retrieval system
