Sinocyclocheilus rhinocerous: 107715134
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Entry
107715134 CDS
T04916
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107715134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srx02000
]
107715134
Transporters [BR:
srx02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107715134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107715134
NCBI-ProteinID:
XP_016376685
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDRIEGQIEERGHWGSKAEFLLAVAGNVIGLGNVWRFPYLCYKYGGGAFLIPYLVFVVTC
GVPLFLLETAMGQYTQEGGITCWHRLCPLAEGIGYAGQLILLYSCMYYIVILSWALFYLI
SSFSSQLPWASCDNTWNTDDCVNLAAKNLTLNRTTLINSTPAATEFWERRVLSLSGGIEE
IGKINWEILLCLIAMWVICYFCIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQ
GVVFYLYPEPARLFDPQVWLEAGAQILFSYSVSVGTLTVLASYNKYNNNCYRDSLWLCVL
NSCTSLVAGFAVFSVLGFMSQEQGIPIAEVAESGPGLAFIAYPQAVAMMPLPQLWAVCFF
IMIILLGLDTQFVSMEAVTTSVMDLFPVILRREGRREIFILLFCLTCFLGQFIMVTEGGM
YVFQLFDYYACNGACVLFLSVFETLVMGWIFGAERMFDIIEDMTKSRPNYIFMLCWKYLT
PLVSVVSFVCSMVEYTPLTFNRWYVYPDWAYALGWLLALSSIILVPGWALGQLFAGKGSL
KQRWRHLCSPDPELPLTCKQRAEMKETTFTAEMEDLVRANIDGDENGL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatagaaggacaaatagaggagagagggcactggggcagtaaagcagagttt
cttctggctgtggcagggaatgtgattggactgggtaacgtgtggaggtttccttacctc
tgctacaagtatggaggaggggcattcctgataccctatctggtgtttgtggttacctgt
ggggtgcctctgttcctgctagagacagctatgggacagtacacacaggaagggggcatt
acatgttggcatcggctctgtccacttgctgagggtattggctatgcaggacaactgatt
cttctgtacagttgcatgtattacatcgtcattctgtcttgggcgcttttctacctcatc
tcctcttttagctcccaacttccgtgggccagttgtgacaacacctggaacacagatgac
tgtgtaaatcttgctgcaaagaatttgaccctcaaccgaacaacgctgattaattcaaca
cctgcagctactgagttctgggaacgcagagtgctctctctctctggaggcattgaggag
atcggtaagatcaactgggagattcttctgtgtcttattgcaatgtgggtcatatgttat
ttctgcatctggaaaggagtcaaatctacaggcaaggtggtgtatttcacagctacattt
ccttatgtgatgctgcttgtgttgctgattcgtgggttgactcttcctggagctctgcag
ggggttgtgttttacctgtaccctgaaccggcccgtctctttgacccgcaggtttggttg
gaggccggagctcagatcttattttcctacagtgtgtctgttggcactctcactgtttta
gccagctacaataaatacaacaacaactgctacagggacagcttgtggctttgcgttctg
aacagttgcacgagtttggtggctggctttgctgtgttctcagtattgggcttcatgtcc
caagagcagggcatccccattgcagaggtggcagaatcagggccaggactagcattcata
gcttatccacaggcagtagctatgatgcctcttcctcagttgtgggctgtttgtttcttc
atcatgattattttgctggggctagatacacagtttgtttcaatggaagccgtcacaacg
tcagtgatggacctgttccccgtgattctgcgcagagaaggacggcgagaaatcttcata
ctgctcttctgtctcacttgcttcttgggccaattcatcatggttacagagggggggatg
tatgtattccagttgtttgactactatgcctgcaatggagcctgtgtattgttcctgtct
gtgtttgagactctggtcatgggttggatttttggggctgagagaatgtttgacatcatt
gaagacatgacaaagtcacggcccaactacatattcatgctgtgctggaaatacctgact
cctctcgtatctgtggtgtcttttgtctgttctatggtggagtacacacccctcactttt
aaccgctggtatgtgtacccagactgggcgtatgcactaggctggttactggccctgtcc
tccatcatactggtgcctggatgggcgctgggtcaactgtttgctgggaaagggagtcta
aaacagcgttggcgtcacctgtgtagtcctgatccagagcttcctctcacctgtaaacaa
agagctgaaatgaaggaaactacttttactgcagagatggaagatttagttagggcaaac
atagatggagatgaaaatggactctaa
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