Sinocyclocheilus rhinocerous: 107715330
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Entry
107715330 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107715330
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107715330
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
Helicases
107715330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
SAM_HAT_C
Motif
Other DBs
NCBI-GeneID:
107715330
NCBI-ProteinID:
XP_016376907
UniProt:
A0A673H433
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MREKKSKEETQITDDPVKNFEKWKRKYNKTKKIVKRVQKTTKKRDWEVERENIQKLVKKY
SEINPKEAVKFSDFPLSKKTLKGLLEAQYRQPTEIQRQTIGFTLQGRDVLGAAKTGSGKT
LAFLIPILECLYREQWTAMDGLGALIISPTRELAYQIYEVLRKVGKNHEFSAGLVIGGKD
LKDESEKIHRTNIIICTPGRLLQHMDETATFHASNLHMLVLDEADRILDMGFTDTLNAIV
ENLPTTRQTLLFSATQTRSVRDLARLSLKNPEYVWVHEQAKFSTPATLEQNYVVCELHQK
VNMLFSFMRNHLKKKIIVFFACCKEVQYLFRVFCRLRPGISILALHGKQQQMKRVEVYND
FVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGEALLVLL
PSEENGMIAQLQEKKVPINKIKVNPEKLVCVQQKLDAFLAQEKEQKERAQRCFVSYLRSV
YLMKNKGVFDVFQLKLPEYAMSLGLAVAPRVRFLNKAQQQKSGVAQDDGAAGRMSEDELK
SFKAQLKGECSKSQSSQSEEEEEDDDDEEEKESLKPAALLCGFNEEDEDDQKDLDLLTVK
RKDVFNINEESQDDEDTDAKAKNKKQKESKFTDAKKMQKRNFKVNTKKIFTEDGEVVQQW
PPLQRAVVPDEEEDEETSGINVEAAKERLRKEDQEFDKIEYRRKIKDKHREKRLKEKAAR
REASKQHKEEIKKADDDDDDDIGDEEEVVAYLSGADEEFDPSTLPDPDKVCNSESSEEED
GHSSDRGGKKRSFSSEDDDSDDEVQQTQVGRKKPRKESTATPLDTGLSLAEDEELVLHLL
GSHS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagaaaaagagtaaagaggagacacagataaccgatgaccctgtgaagaatttt
gagaaatggaaaaggaaatacaacaaaacaaagaaaatagtcaaacgagttcaaaagacc
actaagaaacgcgactgggaggtggagagagaaaacattcagaagctggtgaaaaagtac
tcggagatcaatcccaaagaggctgtgaagttctctgattttccactctcaaaaaagact
ctgaaaggtcttcttgaggctcagtacaggcagcccacggagattcagaggcagacgatt
ggctttactttgcaagggagagatgttcttggtgctgcaaagacaggctctggaaagact
ttggccttcctcatcccgattttggagtgcttgtatcgtgaacagtggactgcgatggat
ggcctcggcgctctcatcatctctcccaccagagagctggcctaccagatctatgaggtg
ctgaggaaggtcggcaagaaccatgagttttctgccggtcttgtaattggtggaaaggat
ctgaaagatgaatcggaaaagatccatcggacaaatatcattatctgtacgccaggacgt
ctgctgcagcacatggacgagacggccacctttcatgcttcaaatctgcacatgctagta
cttgatgaggctgacagaattctggacatgggtttcaccgacacactcaacgccattgtt
gaaaaccttccgacaacacggcagacccttctcttctctgccactcaaaccaggtccgtc
agagatctggccagactgagcctgaagaacccagagtatgtgtgggtccatgagcaggcc
aagttcagtactccagcgactctggaacagaactatgtggtgtgtgagctgcatcagaaa
gtcaacatgctcttctcgtttatgaggaatcaccttaagaagaagatcatagtctttttt
gcctgctgcaaagaggttcagtatctgttccgggtcttctgccggttgcgtccgggtatc
tccatacttgctttgcatggcaaacagcagcagatgaagagggtggaggtttataatgac
tttgttcgcaagacctcagccgtcctctttgccacagacatcgctgccagaggacttgac
ttccctgcagtgaactgggtgctgcagtttgactgtcctgaagatgcgaacacatacatc
cacagagttggcagaacagccaggtataaggagggaggcgaagctcttcttgtcctattg
ccctcggaggagaacggcatgattgcacagcttcaagagaaaaaagttcccattaacaaa
atcaaggtgaacccagagaagctggtgtgcgtccagcagaagttggacgcctttctggca
caggagaaagagcagaaggaacgagcacagaggtgttttgtgtcctacctccgctcagtc
tatctgatgaagaacaaaggcgtgtttgatgttttccagctcaaactcccagaatatgct
atgtcactgggtttggcggtggcccctcgggtccgtttcctcaacaaggcccagcaacaa
aagagtggagtggcgcaggatgacggtgctgcaggacgcatgtctgaagatgagctgaag
agttttaaagcccaactcaaaggagagtgttctaagtctcagtcctcacagtctgaggaa
gaagaagaggatgatgatgatgaggaggagaaggagtcattaaagcctgcagctctgcta
tgtggctttaatgaagaggatgaagacgaccagaaagatctggacctactgactgtcaag
cgtaaagatgtgttcaatatcaatgaagagagccaggatgatgaggacacagatgctaag
gccaagaataagaaacaaaaggaatccaaattcacagatgcaaagaaaatgcagaaaaga
aacttcaaggtcaacactaagaagatcttcactgaggatggcgaggtggtgcagcagtgg
cctccattgcagagggctgtggtaccagatgaagaggaggacgaggagacatctggcatt
aacgtggaagcagccaaagagcggctccgcaaagaagaccaggagttcgacaagatcgag
taccgtcgtaaaatcaaggacaaacatagggagaaaagactgaaggagaaagcagctcga
agggaagcgagcaaacagcataaagaggagataaagaaagctgatgatgatgacgatgac
gatattggtgatgaggaggaggtggtagcatatctgtcaggtgccgatgaagaatttgac
cccagcacacttcccgaccccgacaaagtgtgcaactctgagtcctccgaggaggaagac
ggccattcatcagaccgcggtggcaagaagagaagtttcagcagtgaggatgatgatagt
gatgatgaagtacagcagacacaggtgggcaggaagaagcccaggaaggagtccacagca
actcctctggacactggcctctcgctggccgaagatgaggagcttgtgttgcatttattg
ggcagtcacagctag
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