Sinocyclocheilus rhinocerous: 107715756
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Entry
107715756 CDS
T04916
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107715756
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107715756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107715756
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107715756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
NDNF
FN3_Tor_3rd
fn3_2
hEGF
Big_5
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
107715756
NCBI-ProteinID:
XP_016377433
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MGMRGLLLACVAVAMLVHLSSAGLVKRVIRHRRESLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTQLKPKSANLQSDQHIEHTTDGENQIVFTHRINIPKQACSCDN
HMPDLKDLLNRLEMLEAEVSSLREQCTSGTSCCGAQVTAGEVTTKPYCSGRGNYSTETCS
CVCEPGWKGVNCSEPECPNFCQDQGRCEDGKCVCFEGFGGEDCSIELCPVDCDENGECID
GACICAEGFIGEDCSLTNCLNNCLGRGRCVDDECVCEEPWTGFDCSELICPNDCFDRGRC
DNGTCYCEEGFTGEDCGELICPKNCNHHGRCVNGQCVCNIGYSGDDCSKLTCLNDCSQRG
HCFNGKCICDPGFEGEDCSILSCPDNCNDRGQCVNGECICDVGYEGDDCSELSCPNNCHD
RGRCVNGKCICKMGFTGEDCSIKTCPHDCHGRGECVDGKCVCHNGFAGEHCGIKTCPHHC
HGHGQCVDGKCVCHHGFAGEDCSIKICPNHCHGRGQCVDGKCICHDGYAGEDCSFKTCPS
HCHGRGQCVDGKCICHDGFAGEDCSIKTCPSHCHGCGQCVDGKCICHDGFAGEDCSIKIC
LNDCHERGQCVDGKCVCHAGFTGHDCSELICPSDCHNRGHCVNGQCVCNIGFTGEDCGTK
TCPNNCLDRGYCEDGKCVCFEGYTGEDCSVLTCPANCNDQGQCLNGMCICDLGFTGDDCS
EISPPRDLTVTEVDPETVDLAWVNEMLVTEYLIAYVPTAPGGLEMEMKVSGEKKTATIRE
LEPGIEYLISVFAVLNSKMSVPVSARIATHLPEPEGLKFKSVRETSVEVEWDPLNIPFDG
WNLIFRNTKEEDGEILNSLTPPETTFEQSGLGPGQEYEVKLEVVKNNSRGPPASKNVVTS
KDAGVQIKCRDIAFSTALITWFQPVAQVDGISVSYGPNTDSSDRKTIKLSSMDTQYHLAE
LYPDTEYELSLMARRGEMTSFPVYETFTTDLDAPKHLKAVEQTDESITLEWKNSRANVLN
YRVKYGPLSGGEHGELVFPSGPQDTTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAV
TDLDAPKDLEVSETTETTLALVWRRPVARIDTYELVFTSADGTETELEVPGAANTYILTD
LNPGMLYTISLTAKRGRKMSVPATLSASTDEEKPQVGNITISDVSWDSFSVSWELDRGEV
EGFLVEVSDPDGLSDGQNHTLSSQEFSLAVTDLSPSTFYRVILYGLYKGELLDPVFAEAI
TEAEPEVEHLSVSDITLHSFKLTWTAPEGIFDTFTLKVVDSNRLGQPLQISVTGDKRTEA
VTGLNEDTEYEIELFGIILGRKFQPIVAVARTGLGTPKGIRFSDVTDTSATVHWTFPRTS
VDSYRVTYVPVQGGSPMTLRVDGGESQAMLPNLTPGVTYQVTVIAVKGLEESEPGSDRVT
TALDKPRGLTAVNITDTEALLLWQPSIATVDGYVITYSADSVAPVMERVSGNTVEFEMSS
LTPATLYTVKVYAVREAAKSAATTTEFTTDVDAPQNLAASNIQTESAMLTWKPPRADISG
YILSFESTDGIVKEVVLSPTATFYSMSPLTSSTEYTVKLQAIAGPKRSRIISTVFTTIGV
LYKHPKDCSQTLLNGETTSGLYTIYLRGEETQPLQVYCDMTTDGGGWIVFVRRQSGKVEF
FRNWKNYTAGFGDLNDEFWLGLSNLHKITSSGQYELRVDLRDKGESAYAQYDKFSVSEPR
SRYKVHVGGYSGTAGDSMTYHHGRPFSTYDNDHDIAVTNCALSYKGAFWYKNCHRVNIMG
RYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPANFRNFEGRRKRS
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcgaggcctgctactggcctgtgtggcagtagccatgttagttcatctctct
agtgctggcctggtgaaaagagtaattagacacagaagagaatcactgtcaccaaccact
gagaacttgaccctcccaagtcctgatcagcctgtggtttttaaccatgtatacaacatc
aacgttccctctggatcactgtgctctgtggacttggattcacctggaacaacacaattg
aagccaaaatcggccaatctgcaatctgaccaacacatagaacacaccacagacggagag
aatcagattgtttttacgcataggattaacattcccaagcaagcttgtagttgtgataac
cacatgcctgacctgaaggatcttctgaataggcttgaaatgctggaggcagaggtatcc
agtctaagagagcagtgcaccagtggaacaagctgttgtggtgctcaggttacagcaggt
gaagtcacaaccaaaccctactgcagtggccgtggcaactacagcactgagacctgcagc
tgtgtgtgtgagcccggttggaagggagtcaactgctctgagccagaatgcccaaacttt
tgccaggatcaaggccgttgtgaagacggcaagtgtgtctgcttcgagggcttcggcggt
gaggactgcagcatcgagctgtgccctgtggattgcgatgagaatggagagtgcatcgac
ggagcttgcatctgtgcagagggctttatcggtgaggactgcagtttgaccaactgccta
aacaactgccttggcagggggcgctgtgtggatgacgaatgtgtgtgtgaagagccttgg
acgggctttgactgctccgagctcatctgtcccaatgactgcttcgaccgtggccgctgt
gacaatggaacctgctattgtgaagagggctttactggggaggactgtggggagcttatc
tgccccaaaaactgcaaccaccatggcaggtgtgtcaatggacagtgcgtctgcaatatt
ggctacagcggagatgactgctccaagttaacctgcctcaatgactgcagtcagagaggg
cactgcttcaacggaaagtgcatatgtgaccctgggttcgagggcgaggactgcagcatt
ctttcctgccctgacaactgcaatgacaggggacagtgcgtaaatggtgagtgtatttgt
gatgttgggtatgaaggtgatgactgctctgagctttcttgccccaataactgtcacgat
cgtggccgatgtgtcaacgggaaatgcatttgcaaaatgggctttactggagaagactgc
agcatcaagacctgtccccatgactgccatggacgcggagagtgtgtagacggcaaatgc
gtttgccataatggctttgctggagaacactgtggcatcaagacctgtccccatcactgc
catggacatggacaatgtgtggacggcaagtgtgtttgccaccatggctttgctggagaa
gactgcagcatcaaaatctgtcccaatcattgccatggacgtggacagtgtgtagatggc
aagtgcatttgccatgatggttatgctggagaagactgcagcttcaaaacctgtcccagt
cattgccatggacgtggacagtgtgtagatggcaagtgcatttgccatgatggttttgct
ggagaagactgcagcatcaaaacctgtcccagtcattgccatggatgtggacagtgtgta
gatggcaagtgcatttgtcatgatggttttgctggagaagactgcagcatcaaaatctgt
ctcaatgactgccatgagcgtggacagtgtgtggacggcaagtgtgtttgccatgctggt
tttacaggccatgactgcagcgaattgatttgccccagtgactgccataaccgaggacat
tgtgtaaatggccaatgtgtgtgtaacatcggattcactggggaggactgtggtacaaag
acgtgtcccaacaactgcctggaccgtggctactgtgaagatgggaagtgtgtctgcttt
gaggggtacaccggtgaggactgctctgttctgacatgcccagcaaactgcaatgaccaa
ggccagtgtctgaatggaatgtgcatatgtgatttaggcttcactggcgacgactgctct
gaaatctccccacccagagacctgactgtgactgaggtcgatccagaaacagtggacctt
gcctgggtcaatgagatgcttgtgacggagtatcttatcgcctatgtgcctacggctcct
ggtggcttggagatggaaatgaaagtctcaggtgaaaagaagacggccactattagggag
cttgagcctggcatagagtacctaattagtgtctttgctgtcctgaacagtaagatgagt
gttcctgtcagtgccagaatagctacacatcttcctgaacccgagggtctgaaattcaaa
tcggttagagagacctcagtggaggtggagtgggaccccttgaacatcccgtttgatggc
tggaacctcatcttcagaaacacaaaagaagaggatggagagattttgaactctctcacc
cctcctgagaccacctttgagcagtctggtcttggacctggacaagagtatgaagtcaag
cttgaggtggtaaagaacaactcccgtggacccccagccagcaagaacgttgtcacaagt
aaagacgcaggtgtgcagataaaatgtagggatatagctttttctacagcccttatcacc
tggtttcagcctgtcgctcaggtggacggcatctctgtgtcctatggcccaaacacagat
tcctcagacaggaaaacaatcaagctttcctccatggatacacagtaccatctggctgag
ctgtaccctgacacagagtatgagctctctctcatggcccgcaggggagagatgaccagc
tttccagtctatgagaccttcacaacagaccttgatgcccccaagcacctcaaggcagtt
gaacagacagatgagagcataactctggagtggaaaaacagcagagccaatgtcctcaat
taccgcgtcaaatacggcccactttctggaggggagcatggagaactggtcttccccagc
ggcccgcaagacaccactcaggctaaaatcactggccttaggcccgggacggagtatgga
atgggagtgacgtcaatcaaggaagagcgtgagagtttgcctgcgacgaccaatgctgtg
actgatcttgatgctcccaaagaccttgaagtaagtgagaccacggagaccacattggca
ctggtttggaggaggccggtcgccagaatcgacacctatgagctggtgttcacatctgcg
gatggcacagaaactgaattggaggtacctggtgctgccaatacctacatcctgactgac
ctgaatcctggcatgctgtacaccatcagcctgactgccaagagaggaagaaagatgagt
gtgccagccactctgtcagcatccacagatgaagagaagcctcaggtgggcaacatcacc
atctctgatgtgtcctgggacagcttcagtgtgtcctgggagctggacagaggagaggtt
gagggctttctggttgaagtatctgacccagatggcttatctgatggccagaaccataca
ctatctagccaggagttcagcctggctgtcactgacctctcccctagtactttctacagg
gtcatactgtatgggctgtacaagggagagctcttagatcctgtctttgctgaagccatc
acagaagctgaacctgaagtggagcatctttcggtctcggacatcaccctgcacagcttt
aaactgacatggacagcaccagaaggcatctttgatacattcactctcaaagtcgtcgat
tctaacagactgggacaacctctccagatcagtgtaactggagacaagcgaacagaagcg
gtgacaggtctcaatgaagatacggagtatgaaatcgagctctttgggatcattttggga
cggaaattccagcccattgtggctgttgctcgaacaggtctgggaacacccaaggggata
cgcttttctgatgtgaccgatacatcagctactgttcactggacttttccccgtaccagt
gtagacagctaccgggtcacctacgtgcccgttcagggtggaagccctatgacactgaga
gtagatggaggagagtctcaagccatgctgcccaatctgacccctggagtaacctaccag
gtcactgtcatcgctgtgaagggcttggaggagagtgaaccaggatctgatagagtcaca
acagccctggataagccacgaggtctgacagcagtcaacatcactgacactgaagctctg
ttgctgtggcagccgtccatcgctactgtggacggatatgtcatcacttacagcgcagac
agtgtggctccagtgatggaacgggtgtctgggaacactgtggagtttgagatgagctca
ctcacacctgccaccttatacactgttaaagtctatgctgtcagagaagcagccaagagc
gctgcaaccaccacagagttcaccacagatgttgatgcccctcagaatctggctgccagt
aatattcaaacagagagtgccatgttgacatggaagccaccaagagcagacatcagcggg
tatatcctcagctttgagtccactgatggcattgtcaaggaggtcgtcctcagccccaca
gcaacattttacagcatgtctccgctgacttcctccacagagtacacagtcaaactgcag
gccatcgctgggccaaagagaagcagaatcatctctacagtcttcaccaccatcggagtg
ctgtacaagcatcctaaagactgctcgcagactctgttaaatggagaaacaacctcaggc
ctgtacactatttacctgcgtggagaagagactcagcctctgcaggtctactgtgatatg
accactgatggaggtggctggattgtttttgtgagacggcagagcggtaaagtggagttt
ttcagaaactggaagaactacactgcaggcttcggtgacctgaatgatgaattctggttg
ggtctctctaacctccataagatcacctcctctgggcagtatgagctgcgtgtggacctc
agagataagggcgagtctgcgtatgcgcagtatgacaagttttcagtctctgaaccacgc
agtcgctacaaagtgcatgttgggggatacagcggcactgcaggtgactcaatgacgtat
caccacggccgtccattctcaacctacgataatgaccacgatatagctgtcaccaactgt
gctctgtcttataagggagctttctggtacaaaaactgtcatcgagtgaatataatgggc
cgatacggagacaacagtcatagcaagggtgtaaactggttccactggaagggtcatgag
cattccattgagtttgcagagatgaagatcaggcctgccaacttcaggaattttgaggga
aggagaaagcgatcataa
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integrated database retrieval system