Sinocyclocheilus rhinocerous: 107715987
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Entry
107715987 CDS
T04916
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107715987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107715987
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107715987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Utp12
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_ACSF4
Beta-prop_WDR75_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
Paf1
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
107715987
NCBI-ProteinID:
XP_016377760
UniProt:
A0A673L1Y1
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MAADGGRAALPCVFSPKSQQFLALCAQDGRLRIWNTDSKTLQQEYVPSAHLSAACTCVTW
GPCRAVQEVPQRKRRKCEAGLAPELSDLLALGTAAGSVLIYSTVKGDLHCTLEGGHSGPV
NSVQWHPEDSVLYSGSDDTHIAEWDLQTGKVRCKWKADRSAVSSLCISSDGKLLLSAGMT
IKMWNLETKEVYRKFTGHSTMVTTLCFATTRPPDSNGMYFLSGAAHDRLLSVWQVRSDGK
DKNSVVSFTLTDEPQHIDLQTSNCKDEPVRLAVVCKDGQLHLFEHFLNGPCKKPLSPVCS
LQVSTMKADSPVPVPLLAAALSADRQNLMLAYGHHLQPVMEKTPFNTSERHICLVRDVHG
TLSLSVDTAVSKVKTPVVNKQSKVLVPGLPGHKAPIKLTPNEAEKRKKEDSTTEMSIEER
LEQIELSVGGRDAGKGTSSLQTDSFAVLLVQGLESKDQRILTKIFQTKKEMLIKNTVARL
PPQAVLPLLEELSSRLQGHPFAALLIVQWFKAVLTQHTSYLSSLPDLVSQLGSIYHMIES
RVKLYQQLTRLHGKLYLLMTQVATNNSAKNVGNISHKAKLVYEEESSDEDEGSRDEGRPE
DDSDNWEEDEAAMELTEDKKNHKDEEDDEEDDMNDESKANGDSDLDPENESEEE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacggaggccgtgctgcgctaccctgcgtcttcagccctaaatcacagcag
ttcctggctctctgcgcacaggacgggagactgcgcatctggaataccgacagcaaaact
ctacaacaggaatacgtgccgtcagcgcacctgagcgcagcctgtacctgtgtgacatgg
ggaccgtgccgagctgttcaggaggtgccacagagaaaaaggaggaaatgtgaggccggg
ttggcacctgagctgtcagatctgttggctctgggcactgctgctgggtcggtcctcatc
tacagtacagtgaagggagacctgcattgtactctggagggaggtcacagtggaccagtg
aacagcgtccagtggcatccagaagactcagtgttatacagcggctcagatgacacacac
atagccgagtgggacttgcagacaggaaaagttcgttgcaaatggaaggcagacagatca
gctgtcagcagcctgtgtataagttcagatggaaagctgctgctctcggcgggaatgacc
atcaagatgtggaacctggagactaaggaagtgtacaggaaattcacaggtcactctacc
atggtaacgactctgtgcttcgccacaacacgacccccggacagtaatgggatgtacttc
ttgtcaggagcagctcatgacaggctcttgagtgtgtggcaggtacggtccgatggcaaa
gacaagaactctgtggtgtcttttactctgacagatgaaccccaacacatagaccttcag
acatccaactgcaaagatgagcctgtgaggttagcagtggtgtgtaaggacggtcaactt
catctctttgagcactttctcaatgggccgtgtaagaagccgctgtctccagtgtgttcc
ctgcaggtgtccactatgaaggcagactcacctgtgcctgtgcctctgctcgcagcagct
ttgtctgccgacagacagaacctgatgctggcgtacggacatcacctgcagcctgtcatg
gagaaaactccttttaacacatcagagagacacatatgcttagtcagagatgtacatggc
actctttcgctctctgtagacactgctgtttccaaggtgaagacaccagttgttaataaa
cagagcaaggttttagtaccaggacttccgggacacaaggcaccaatcaaattaactccc
aatgaagcagagaagaggaagaaagaggacagtaccacagagatgtctatcgaggagcgg
ttggagcagattgagttgagtgttggagggagggatgctggtaaaggcacgtcctctctg
cagacggacagttttgctgtactgcttgtgcagggactggagagcaaagaccagcggatc
cttaccaaaatatttcaaaccaaaaaagagatgttgataaagaacactgttgcccggtta
ccacctcaggctgtcctgccattgctggaagagctgtccagtagactgcagggacatcca
ttcgcggctctgcttatagttcagtggtttaaggctgtacttacacaacacacatcatac
ttgtcttcgctgccggatctagtgtctcagttgggctccatctaccatatgattgagagc
agggtgaagttatatcagcagctcacccgactccatggcaaattgtacctgctcatgaca
caggtggcgacaaacaacagcgctaaaaatgttggtaatatttctcacaaagcaaagttg
gtttatgaagaagagtcttcagatgaggatgaaggctcaagagatgaggggcgtcctgag
gatgactctgataactgggaggaggatgaggcagcaatggaattgacagaagacaaaaag
aaccacaaagatgaggaggacgatgaagaggacgatatgaatgatgaatcaaaagcaaat
ggtgattcagatctggaccctgaaaatgagagcgaggaagaataa
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