Sinocyclocheilus rhinocerous: 107716468
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Entry
107716468 CDS
T04916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107716468
09123 Folding, sorting and degradation
03018 RNA degradation
107716468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107716468
03041 Spliceosome [BR:
srx03041
]
107716468
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107716468
mRNA degradation factors
5'-3' decay
Lsm complex
107716468
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107716468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
107716468
NCBI-ProteinID:
XP_016378415
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MAAIAATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatcgcggcaacgaatccctcgcagcttttacctctcgagctggtggataaa
tgcattggttcacggattcacatcgtcatgaagaacgataaagagattgtgggaactctg
ctcggatttgatgactttgtcaacatggttcttgaggatgtgacagagtttgaaatcact
ccagaaggaagaagaatcacaaagctggatcagattctactcaatggcaataacatcaca
atgttgattccaggaggagaaggaccagaagtttga
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integrated database retrieval system
