Sinocyclocheilus rhinocerous: 107716490
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Entry
107716490 CDS
T04916
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04137
Mitophagy - animal
srx04140
Autophagy - animal
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107716490
04137 Mitophagy - animal
107716490
04148 Efferocytosis
107716490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107716490
Transcription factors [BR:
srx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107716490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
107716490
NCBI-ProteinID:
XP_016378455
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MRLAISYLRMRKLLSSDDEEKENELECQLNSFYLKALEGFLMVLSEDGDMVYLSENVSKS
MGLTQFDLTGHSIFEFSHPCDHEELREMLVHKTGSKKTKEQNTERSFFLRMKCTLTSRGR
TVNTKSATWKVLHCAGHVRVQERGEGSGDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSK
TFLSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQA
TTGQYRMLARKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTETE
PEAEEKENQEMEDEASEVDILKLFKPESLKCPVESSDLYDKLKEEPEALTVLAPAAGDTI
ISLDFNNSDSDMQLLKEVPLYNDVMLPSSSEKLPISLSPLTPIDSTPVLNKLETGVEDFP
FSSASDSTNTPSTSGLGSSGPNSPMDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPFSS
QAMEDLDLEMLAPYIPMDDDFQLHIPSPLDPLPSGPHSVSAMSSLFQPLPSPASPASSSS
SVVKQGPSSRAPSPLHLLQEVCSATVSPFSGSRDVSPARSPAPQSSNQLNNRELSPKMLA
IQNAQRKRKLEEVTSLCEAVGLGALLQSVDSAVEPGKRAKVFEVKGSSVLGGNKTILILP
SDVASRLLCSSLEGSSGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggccatcagctacctgcgcatgaggaagctactgagctctgatgatgaagag
aaggaaaatgaactggagtgtcagctgaacagcttttatctgaaggccctggagggtttc
ctcatggtcctgtctgaagatggagacatggtttatctctctgagaatgtcagcaagagc
atgggcctcacgcagtttgatctgactggtcacagtatctttgagttttcacacccatgt
gaccatgaggagctgagagagatgctggtccataagacaggatccaaaaagaccaaggaa
caaaatacagagcgcagcttcttcctgcgtatgaagtgcacactcactagcagagggcgg
actgtcaataccaagtctgctacgtggaaggttcttcactgcgctggtcatgtccgtgtt
caggagcgcggcgagggttcgggagactctggctttaaagagcctcctctaacctacctt
gtgctcatctgtgagcccattcctcatccctcgaacatcgaggtgcctctggacagcaag
acctttcttagccgccacactctggacatgaagttctcgtactgtgatgaaaggatcaca
gagctgatgggatatgagccggatgatcttctgaacaggtctgtgtacgaatactatcat
gccctggattcagatcacctcaccaagacacatcacaacttgttcgccaagggccaggcc
accacaggccagtaccgcatgctggccaggaaaggtggttttgtgtgggtggagactcag
gccaccgttatctacaaccccaagaattctcagccgcagtgcattgtgtgcgtcaactac
gttctcagtggcattgtggagggggatgttgtcctgtccttgcagcagactgagacagag
cccgaggctgaggagaaagagaaccaggagatggaagatgaggcctctgaggtggacata
ctcaaactcttcaagccagaaagcctcaagtgtcccgtggagagctctgatctttatgac
aagctgaaagaggagcctgaggctcttactgtgttggcgcctgctgcaggagacaccata
atttctctggacttcaacaactcagattctgacatgcagctgctgaaggaggtgcccctc
tacaatgatgtcatgctgccctccagcagcgagaagctgcccatcagtctgtctcctctg
acacccattgactccaccccagttctgaacaaactagagaccggagtggaggacttccct
ttcagctctgcctcagactccacaaacacaccttccacatctggactgggctcctcgggg
cccaacagccccatggattactgtttccaagtagattcagacatcagttctgaattcaaa
ctggacctggttgagaaactgtttgctattgataccgaggcaaagaccccttttagctcc
caggccatggaggatctcgacctagagatgctggctccgtacatcccaatggatgatgac
ttccagctgcatatcccctctccgctggatccgctcccctctggccctcactctgtgtca
gccatgagctccctgttccagcccttaccctcccctgcgtctccagcctcttcctccagc
agcgtagtgaagcaggggccatcatcacgggccccttcacccctgcacctgctacaggag
gtgtgcagtgccactgtctcacccttcagtggcagtcgggatgtttctcctgctcggtcc
cccgccccacagagcagcaatcagctcaacaacagagagctgtctccaaagatgttagcc
atccagaatgcccagcgtaagaggaagttggaggaagtgacatcactttgtgaggctgtt
ggactgggtgctttgcttcagagtgtggacagtgctgtagagcctggaaagagggcaaag
gttttcgaggttaaaggatcgagtgtgctcggaggaaataaaaccattctcatactgccc
tctgatgtggccagtcgcctgttgtgcagttctttagagggcagcagcgggctgcctcag
ctaacacgttatgactgcgaagtcaacgctcccgtgcaggaccgccatcatctgctgcag
ggagaggagctcctgcgtgctctggaccaagtcaactga
DBGET
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