KEGG   Sinocyclocheilus rhinocerous: 107716540
Entry
107716540         CDS       T04916                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03030  DNA replication
srx03410  Base excision repair
srx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107716540
   03410 Base excision repair
    107716540
   03420 Nucleotide excision repair
    107716540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srx03032]
    107716540
   03400 DNA repair and recombination proteins [BR:srx03400]
    107716540
Enzymes [BR:srx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107716540
DNA replication proteins [BR:srx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107716540
DNA repair and recombination proteins [BR:srx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107716540
SSDB
Motif
Pfam: POL2_thumb DNA_pol_B_exo1 DUF1744 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 107716540
NCBI-ProteinID: XP_016378501
LinkDB
Position
Unknown
AA seq 1715 aa
MVLQNSGRYKADRGGGDQDNQQDDASALSAVKRLERSQFTDGMDEHFGFERMKEPGEKTG
WLINMHPTEILDDDKRMISAVDYYFIQEDGNRFKIALPYKPYFYIATKKNCEREVISFLS
KKFQGKVAKLEVVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVKREISPAVRKNRERE
KSNDAYTSMLSSALVGGSVVTEDEDGTSKKMTEQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMLSYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHIHETKPNIFV
TYNGDFFDWPFVETRAAQLGLNMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVERTLRHAIEEEEKIPLEQVTNFNEVC
DEIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHVLNREEQARHEK
KRLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGFHKVWKKKLS
TAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGGNARNGSRTDTDWDRCS
LFSLLALQTCALRTSRAQVLSVPAHYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRA
FRDRRYEFKGFHKVWKKKLSTAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYNS
STISTLTTDGIWCVLPNTFPENFVIKSTNEKKAKVTISYPGAMLNIMVKEGFTNHQYQEL
VDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEV
KRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKAANMPDAELFELI
SENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGSPVTERA
VPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWGYYIERLGSAIQKIITIPAALQQ
VAHQTLPAGETPDMEDFGAPQHPVQPAILISTKRKRISQGEDSQAESQEQELTQSWREIL
GPPPVMGATREELLVWLRYHKKKWELQLRQRKERRKRRRLIGESQPTGGGVIRGGLTTGL
GSFLRRTARSILDMPWQIVQIAETSHPGFYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQ
EEGANCKKVNRILPRSGVVYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLF
RALVQLGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQG
HKALFGLFIPSQRKASIFVLDTVRSNQMPNLSSLYGAERTALLEKTTEELLPPEKHLFEV
RAENDVKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLTAGMTVLEEFPVVPVHVID
EISYNVLDWQRHGARRMIKHYLNLDSCLSQAFDMA
NT seq 5147 nt   +upstreamnt  +downstreamnt
atggttttacaaaacagtgggcgatataaagcagaccgaggtggtggagatcaggacaac
cagcaggatgatgcatcagctttgtccgccgtcaagcggctggagcgcagtcagttcact
gatgggatggacgagcactttggcttcgaacggatgaaggaacctggggagaaaacggga
tggctgatcaacatgcacccgactgagattctggatgatgacaagcggatgatcagtgct
gtggactattacttcatacaggaggatggaaacagattcaagattgctcttccctataag
ccgtatttctacatagccactaaaaagaactgtgaaagagaggttatctccttcctgtca
aagaagttccagggaaaagtggcaaagcttgaagttgtcccaaaggaagacttagatctg
cctaatcacctggtgggcctgaagaggaattacatcaaactctcttttaacacggtggat
gaccttgttaaagtgaaaagggagatctcacctgctgtccgcaagaacagagagagagag
aagtccaatgatgcctataccagcatgttatccagtgctttggttggtgggagcgtagtg
acagaggatgaggatggcacttcgaagaaaatgactgagcagcttgacaacatcgtagac
atgcgggaatatgacgtgccttatcatgtccgcgtttctattgacctgaagattcatgtg
gctcactggtacaatgtgcggtacagaggaagtgcctatcctcctgagattgtgcgcagg
gatgatcttgtggaaagacctgatcctgtagtgttggcatttgatattgagaccactaaa
ctcccactgaagtttcctgatgctgaaacggaccagattatgatgctatcatacatgata
gatgggcagggcttcctcatcacaaacagagaaatagtctctgaagacattgaggacttt
gagttcaccccaaaacctgaatatgagggccccttcactgtatttaatgaacctgatgag
gcctctcttattcagagatggtttgaacacatccatgagaccaagccgaacatttttgtc
acttacaatggagatttctttgactggccatttgtagaaaccagagcggcccagcttggc
ttgaatatgcatcgggagatcggcttccagaaggacaatcagggggaatataaagccagc
caggctattcacatggactgcctcaggtgggtgaagagagacagttacctgcctgtagga
agtcataacctcaaggctgcagcgaaagctaagttaggctatgaccctgtagagctggac
ccagaggagatgtgccgtatggctactgaagaatcacagactctggccacctattcagtg
tctgacgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgcc
ctctgcactataattcctatggaacccgatgaggttttgcggaaaggctccggtaccctg
tgcgaggccttgctgatggttcaggccttccatgccaacattgtcttcccaaacaagcag
gagcaggtctttaacaaactcacagatgatggtcatgtacttgactctgagacttatgtt
ggcggccatgtcgaggctctagagtctggtgtgtttcgtagtgatatcccctgccgcttt
aaaatgaatccagcagcatttgacttcttgattcagagggtggagcgtactctccgtcat
gcaattgaggaagaggagaagattccccttgagcaggtcaccaactttaatgaggtgtgt
gatgaaatcaagaggaagcttatctctctaaaggaagtgcccaatagaatcgagtgtcct
cttatttaccatctggatgtgggggccatgtaccccaacatcatccttaccaacagacta
cagccctctgccatggtggatgaggcgacctgtgccgcctgtgattttaataaacctggt
gcaaactgtcagcgcagaatgacttggcagtggagaggagagatcatgcctgcgagtaga
agtgagtttcatcgcattcagcagcaactggagtccgagaagtttccccctctctttccg
aatggtccacctcgtgctttccatgtgctcaacagagaagaacaagctcggcatgagaag
aagcggttgggagattactgtcgaaaagcctataagaaggttcacctgaccagactggag
gagagagtcactaccatttgccagagagagaactctttttatgttgacacagttcgagcc
ttcagagaccgtcgatatgagttcaaaggattccacaaggtgtggaagaagaagctgtcc
acagcacaggataatggggacgcagcggaggtgaagcgctgcaagaacatggagattctc
tatgagtctctgcaactggcgcacaagtgtatcctcaactccttctacggatacgtcatg
agaaaaggtggaaatgcacggaatggttcaagaacggacacagattgggaccgctgttct
ctgttctctctgctcgcgcttcagacgtgtgctctgcgcacaagcagggcgcaagttctt
tccgttcctgcacattactgtcgaaaagcctataagaaggttcacctgaccagactggag
gagagagtcactaccatttgccagagagagaactctttttatgttgacacagttcgagcc
ttcagagaccgtcgatatgagttcaaaggattccacaaggtgtggaagaagaagctgtcc
acagcacaggataatggggacgcagcggaggtgaagcgctgcaagaacatggagattctc
tatgagtctctgcaactggcgcacaagtgtatcctcaactccttctacggatacaactca
tccacaatatccacactgaccactgatggtatctggtgtgttcttcccaacacctttcct
gagaactttgtcataaaatccaccaatgagaagaaggcaaaggtgaccatcagttatcca
ggagccatgctgaacatcatggtcaaggagggcttcacgaatcatcagtatcaagagctg
gtggacccagcatctttaacatatgagaccagagctgagaacagtatcttctttgaagtt
gatgggccgtacttggctatgatcctgcctgcctctaaagaagaaggaaaaaagctaaag
aaaaggtatgccgtgtttaacgaggacgggtcactggctgagctgaagggctttgaggtg
aagagaagaggagaacttcaactcattaagatcttccagtcatctgtgtttgaggccttc
ctgaaaggcacaactctagaagaggtttatgcctctgtggctaaagtggctgactactgg
cttgatgtgctctacagcaaggctgctaacatgccagatgcagagttgtttgagctgatt
tcagaaaaccgctccatgtcccgtaagctggaagattatggcgaacagaagtccacctcc
atcagtacagccaagcgtcttgccgagttccttggcgatcagatggtgaaggacgctggc
ctcagctgtcgctatgtcatctcccgcaaaccggagggctcacctgtcactgaaagggcg
gtccctctggccatttttcaggctgaagagagtgttaaaaagcatttcttacgcaaatgg
ctgaagatgcccagtctccatgaccttgatattagatctattctggactggggttactat
attgagcggttgggcagtgccatacagaagatcatcactatccctgcagctctacaacag
gtggcccatcaaacgttaccagcaggtgagactcctgatatggaggacttcggtgctcct
cagcatcctgtgcagcccgccatactcatcagcacaaagaggaagaggatatctcaagga
gaggacagccaggctgagtctcaagagcaagaactcacacagtcttggagagaaatactg
gggccaccaccagttatgggcgccactcgggaggaacttcttgtctggttgcgctaccat
aagaaaaaatgggagctgcagcttcgtcagaggaaagaacggcggaagcgacggcgtttg
attggggaatctcagccgactggcggtggtgtaatccgtggtggactgacaacagggcta
ggcagcttcctgcgaagaaccgcccgcagtattctagacatgccctggcaaattgtacag
attgcagaaaccagtcacccaggcttttataagctgtgggctgtcattggcagtgacctg
cactgcatgaagctcaacatcccacgagtgttttatgtcaatcagaaagtgcccaagcaa
gaagagggagctaattgcaaaaaggtgaaccggatacttccacgttctggtgtggtgtat
tatctgtaccagtatgctgttcctgaggacatgtaccaggaacacatcaatgagatcaat
gctgacctctcagctcctgatattgagggtgtctatgaaacacaggttcctctgctgttc
cgggctctggtccagttgggctgcatgtgtatggtcaataaacaggtggtcagagacctg
gctggcagagaggctgataccttcgacctggagcacctagaaatgagatccctggcccag
ttcagctacctcgagccaggcagtgtaaggcacatctacctgtaccatcacagtcagggc
cataaggctctctttggcctcttcataccatcccaacgcaaagccagcatctttgttctt
gacacggtgcgcagtaatcagatgccgaaccttagctcgttgtacggagcagagcgcacc
gcactcctggagaagaccacagaggagctgctgccacctgagaaacatctgtttgaagtg
cgtgctgaaaacgatgtcaaagccatctaccgcgcactgcaacgcattctcctcaactac
aaggaggagcggcgtggtccgaccctgattgctgttcaatctaactgggagctgcggcgg
ctgacggctggcatgactgtactggaggagttcccggtggtcccggttcatgttattgat
gagataagttacaatgtactggactggcagcggcacggagctcgacgcatgataaaacac
tacctgaacctggacagctgcctctcacaggcttttgatatggccag

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