Sinocyclocheilus rhinocerous: 107716544
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Entry
107716544 CDS
T04916
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03030
DNA replication
srx03410
Base excision repair
srx03420
Nucleotide excision repair
srx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107716544
03410 Base excision repair
107716544
03420 Nucleotide excision repair
107716544
03430 Mismatch repair
107716544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107716544
03036 Chromosome and associated proteins [BR:
srx03036
]
107716544
03400 DNA repair and recombination proteins [BR:
srx03400
]
107716544
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107716544
DNA Replication Termination Factors
ELG1-RFC complex
107716544
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107716544
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107716544
Check point factors
HRAD17(Rad24)-RFC complex
107716544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_14
AAA_24
RuvB_N
AAA_16
ResIII
AAA_assoc_2
DEAD
DUF815
PhoH
AAA_7
ATPase_2
TIP49
AAA_19
AAA_5
AAA_30
AAA_2
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
Motif
Other DBs
NCBI-GeneID:
107716544
NCBI-ProteinID:
XP_016378504
UniProt:
A0A673I1T0
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MASTSKAQPQTRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQSQMIPRL
EHVIQQESIDITPDGMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSD
IANILDWALNKDFTTAYNQILQLKTLKGLALHDILTEVHRLIHCVDFPPSIRMGLLIKLA
DIEYRLASGTNEKIQLSSMVAAFQAVRDTVVSDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagtaaagcacaacctcagacgagaaatttaccatgggttgaaaagtac
aggccacagacattagatgacctcatctctcatcaagacatcctgagcacaattcagaag
ttcatcagtgaagaccgattgcctcatctgctcttctatggacctccaggaacaggaaag
acctctactatactagcatgtgctaaacagctgtacaaagataaagagttcaactccatg
gtcctggagctcaatgcgtcagatgaccgtggcatagatgtggtgagggggccgatcctc
agctttgccagcacacgaaccatcttcaagaaaggctttaagttggtgatcctggacgag
gcggatgctatgacccaggacgcacagaatgctttaaggagagtcattgagaagtttaca
gagaacacacgcttctgtctgatctgtaactacctttcaaagatcatacctgcgctgcag
tctcgatgcacacggtttcgtttcggccccctgtcccagagccagatgattcccagacta
gagcatgtgatacagcaagagagcattgacatcactccagatggcatgaaggccattgtg
accctttcaacaggagacatgaggcgatcattaaacattttacagagtacacatatggcc
tatgggaaggtgacagaggagacagtgtacacatgtactggacatcctctcagatcagac
atcgctaacatactggactgggccctcaataaagacttcaccactgcatataaccaaatt
ctgcagctcaaaactctaaaaggtctggcacttcatgacattttaacagaagtccatcgt
ctcattcactgtgtggacttcccaccctccatccgcatgggcttgcttataaaacttgcc
gatattgagtatcgtctggcctctggaaccaatgagaagatccagctgagctcaatggtt
gcagctttccaggctgttagagacacagtagtcagcgatggatag
DBGET
integrated database retrieval system
