Sinocyclocheilus rhinocerous: 107716697
Help
Entry
107716697 CDS
T04916
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107716697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107716697
03019 Messenger RNA biogenesis [BR:
srx03019
]
107716697
04121 Ubiquitin system [BR:
srx04121
]
107716697
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107716697
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107716697
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107716697
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107716697
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107716697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-C3HC4_2
zf-UDP
zf-RING_2
zf-CCCH_2
Nup35_RRM_2
DZR_2
RDD1
zf-C3HC4
Torus
Motif
Other DBs
NCBI-GeneID:
107716697
NCBI-ProteinID:
XP_016378696
UniProt:
A0A673J1N0
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSRSPELKEDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADAEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVI
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKSNPNFLQTSACGEKSKSKPNSTQRPNSTNKEGWPSLQNYGKMVNGLTTEHRKSP
PLLDCLTDSDHMTPDEPDLEQGTEQNTGLPPFPSALEPTSPIGKQSESINIGNGETISQT
SSSDSPSPPPGLTKPSLVVPISVAKLTARSPFEGAAAESQSLFSDNSNFRHPNPIPSGLP
PFSSSPQGASDWPMTPEPQSLFTSDTIPVSSSTDWQAAFGFGSSAKQQQQQDDDLGFDPF
DITRKALADLIEKELSVEEHSPLSPNPSSHQRRLPHLQHRGLYNSFSLPQHMAARHPWMG
LPTRNNLTHLNHTASATHSHFLDLSMPAQHHSTGLGGIPISENNGSVESINVKEWQDGLR
ALLPNININFGGLPNSTSSSSSSSTSSVNHIGVPVGSTGVSHSLSWDSTASWMDPAIITG
IPASTGNSLDCLQDDNPPHWLKSLQALTEMDGPPSSSALPQPPHTGLLDAAAQLSLHRAA
WAPYLPPPTLTPSQFHSPPPGFQTAFRPPVQTATDILQSAGIDRH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagtcccgagctgaaagaagaccccatggagtgcccactgtgcatggaaccg
ctggagattgacgatgtcaacttcttcccctgcacctgcggctaccagatctgccgcttc
tgctggcaccgcatacgcacagatgagaacggcctctgccctgcttgcagaaagccttac
ccagaggatccggcagtatacaaaccgctgtcacaagaggagatccagaggataaagaac
gagaagaagcagaagcagaacgaaaagaagcagaaggtgacggagaaccgcaagcacctg
gccagtgtccgtgtggtgcagcggaacctcgtattcgtcgtgggactttctcaaagactt
gcggatgccgaggttctaaagcgcccagaatatttcggaaagttcggcaaaatccataaa
gtggtcatcaataacagcacatcatatgcaggttcacagggtcctagtgccagtgcctat
gtaacttacattcgttcagaggacgcccttagagcaatacagtgtgtgaacaatgtcata
gtggatggtagaacactcaaggcttctttaggtacaacaaagtactgcagttattttctc
aaaagcatgcagtgtcctaaaccggactgcatgtatttacacgaactaggggatgaagcg
gctagttttacaaaagaagaaatgcaggctgggaaacatcaagagtatgaacaaaaatta
ctccaagacctttacaaatcgaaccccaactttttacaaacctcagcatgtggagagaag
tcgaagagcaaacccaattccactcagagacccaatagtaccaataaagaagggtggccc
tcattacagaactatgggaaaatggttaacggtttaaccacagagcatcgcaagtcccct
cctcttttagactgcctaacagactcagaccacatgactccagatgaaccagaccttgaa
cagggaacagaacagaacacaggccttccacctttcccatcagccttagagcctaccagt
ccaattggcaaacaatcagaatccataaatataggaaatggggaaactatatcacagaca
tccagtagcgattccccatctcctccacctggccttactaaacccagcctcgttgtgccc
atcagcgtggccaaactcacagcgcgctcacccttcgagggggcggcagcagagtctcaa
tctcttttctcagacaacagcaatttcagacatcccaaccccatccccagcggcctgccc
cccttctccagttcaccacagggagcctctgactggcccatgactccagaaccacagagc
cttttcacctcagacactatcccagtgtcgtcctctactgattggcaggcggccttcggt
tttggctcttcggccaagcaacagcagcagcaggacgatgacctcggctttgacccattt
gacatcacacggaaggccctggccgacctcatagagaaagagctgtcagtcgaggagcat
tcccccctctctcccaatccctcttcccaccagaggcgccttcctcacctccagcacaga
ggcctctataactccttcagcctgccccaacacatggccgcacgccacccctggatgggc
ctccccacccgcaataacctcacacacttgaaccacacggcctcagctacgcacagccat
ttcttagacctgagcatgccggcccagcaccacagcaccggccttggggggattcctata
tcagaaaacaatggctctgtagaaagtataaatgtgaaagagtggcaggacggactgcga
gcactcctaccaaatatcaacatcaacttcggaggcctcccgaactctacctcttcctcc
tcctcttcctccacctccagtgtgaaccacatcggggtgccggtaggctcgactggagtc
tcgcacagcctcagctgggacagtacggccagttggatggatcccgccatcatcacaggt
atcccagcatctacaggcaacagtttggactgtctccaggatgacaatccgccacactgg
ctcaagtcgctgcaggcactcacagagatggacggaccgcccagctccagcgcactccca
cagcccccgcacaccggcctcctggacgcggcggcccaactctccttacacagagccgcc
tgggccccttacctccctcctcccacactaaccccaagtcagttccactccccacctcca
ggctttcagacagccttcagacccccagtgcagacggccacagacatcctacagagtgcc
ggtattgaccgtcactaa
DBGET
integrated database retrieval system
