Sinocyclocheilus rhinocerous: 107716705
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Entry
107716705 CDS
T04916
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107716705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107716705
03036 Chromosome and associated proteins [BR:
srx03036
]
107716705
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107716705
Coactivators
SAGA/TFTC/STAGA complex
107716705
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107716705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
107716705
NCBI-ProteinID:
XP_016378709
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MMSLRFPQCLSSKTTHAPCAFLKRLSKMAGVPDPLEDMLYSEVDEKAVSDLVGSLESQLG
GQNKAVGPQGDIRRPSNALNPHLGKLLAVQVGTTQEQQRQPERNQEGNSQENGPDRIPGS
SSVPSTSNLPSTSANLVTAANRVQYHSSNPSTCSSDAAPTDSHPNTNHISSAVRTVPARI
QTVNGSSGTINSSVIASAPASVNGIDIGSGVGSGKSNMSAPTSTNTAFVSAQPNSTLPHA
NVSLDSQANPTIALHRPPSTITSVVHNGGDPKVSGLPVQGAGLVPTSVTFTNTEPKSDLQ
NQMKAIVPNKLPGTPVGLHPSTPTQIIVSSSPVVTSLSVASTPSVLAKPATTALVGQPTT
LLRPGTPIQGTATVAPPQRQGAPTTQLIVRPQQQTTIQLPPGFTIPPGMVLVRTEAGQLA
LVPQQVLAQAKAQNQNKGTLSPRPATPTAGTAFRVTTPVAQQKTAVVTITSAQKPTTTVI
TAGARVQPAPQTVLKPSVTPQSPITTSVAAPANRAPILSQEMQENVKKCKNFLATLIKLA
SHNSPSPETSRNVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPFLKKSLPALRLT
LLNSQQSLTQLSQTSATSTPLTANTIKAPAPNTLPTTVSTIRPAAALAPTTTMAVKRPGF
QATPTRMPVVITQTVRAQGAVGTPLQVRSPMGVAVQAMANQKQKLNDPGGGTFRDDDDIN
DVASMAGVNLNEENARILATGSELVGTQIRSCKDEAFLPASLIHKRLLETAKKFGVTEVS
MEAVTLISHAAQSRLRSMLEKVSAVAQHRVDSCKDEELYEQTSDVRTQLKFFEQLEKIEK
QRKDDEERELLMKAAKSRSKQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPR
KKRKLDSPGASAGAEFPAGSSGSATASTSSSTSSVRQTRQRVTRVNLRDLIFCLEQERTT
ARSMLLYKALLK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattacgtttcccacaatgcctcagcagcaaaacaacgcacgcgccgtgcgca
tttctaaagcgtctatcaaagatggcgggcgtccccgatccactggaagatatgctctac
tccgaagtggacgaaaaagccgtcagtgacctcgtaggctcgttagaatcgcagttgggt
ggacagaacaaggcggtcggtcctcaaggcgacatcaggagaccctcaaacgcgctaaat
ccacacttggggaaattactggccgtacaagtaggaacaacacaggagcagcagcggcag
ccagagcgaaaccaggagggaaactctcaagaaaacggtccggacaggataccggggtcc
agttctgtcccgtccacctcgaacctgcctagtacctctgcgaatttggttacagccgcg
aaccgggtgcaatatcattcatcaaatccatcaacttgttcaagtgacgcagcacctaca
gactctcaccccaatacaaatcacatttcgtctgctgtccggacggttcccgccagaata
cagactgtgaacggaagcagtggcacgataaactcttctgttatcgcttctgctcctgct
tctgtaaacggtattgacattggttcaggtgtaggtagtggtaaaagcaacatgtctgct
cctactagtacaaatactgcttttgtgtccgctcagcccaacagcacactgccacatgcg
aatgtgtcactagatagtcaagcaaaccccaccatagcactgcacaggcctcctagcacc
atcacaagtgtcgtacacaacggaggtgatcccaaagtctcaggattgcccgtgcagggt
gccggtcttgtgcccacctccgtgacattcacaaacacagagcccaaatctgaccttcaa
aaccagatgaaagccatcgtcccgaacaagcttcccgggactcccgtagggttgcacccc
agcacacccactcagattatagtgtcgtccagtccagtggtgacctcactttctgtggca
agcacgccctctgtccttgcaaagccagcgacgactgctctcgtaggacagcctacgacc
ctgttgagacccgggacgcccattcagggcacagcaactgtggcgcccccacagcgtcag
ggggctcctacgacccagctgatcgtcagacctcagcaacaaactaccattcagttaccg
ccgggattcaccatacctccaggtatggtgctggtacgcacggaggccggtcagctggcc
ctggttcctcagcaggtcctagcccaggccaaagctcagaaccaaaataaaggcaccctg
tcaccgagacctgctacacccactgctggaacggctttcagagtcactacacctgttgcc
cagcaaaagacagcagtggtaacaattacctcggctcagaagcccaccaccacagtcatt
acagcaggggcccgtgtgcagcctgcaccgcagacagtcctcaagccctctgtgacccct
cagagtcccatcaccacctctgttgctgccccagctaaccgagcccctatcctctctcag
gaaatgcaagagaatgtaaagaagtgcaagaacttcctagcaacgcttatcaaactggca
tcccataattccccctcgccggaaacatctcggaatgtgaaggcactagtgcaggatctg
ctggacgcaaaaattgagcctgaggagtttacaaatcgccttcagacagagttgaaatca
tctcctcaaccgtacctgatcccttttttgaagaaaagcctgcctgctttgcgtctgact
cttctgaactcccagcagtctttaactcagctgtctcagacctctgctacatccacccca
ctgacggcgaacactattaaagctccagcaccgaacacactgcccaccactgtatctacc
atccgaccggctgctgccctggctcccactaccaccatggctgttaagaggcctgggttt
caggctactccaacacggatgccggtggtgattacacagacagttcgtgctcaaggtgct
gttgggacacccttgcaagtgaggagccccatgggtgtggctgttcaagccatggccaat
cagaaacagaagctgaatgaccccgggggtgggactttcagggatgatgacgacatcaat
gacgtggcatccatggctggtgtgaacctaaatgaggagaacgcccgtatcttggccacg
ggttcagagctggtgggcacccagatccgttcctgtaaggacgaggccttccttcctgcc
agcctgatccacaaacgtctcctggagactgccaagaagttcggcgtgacggaggtgtca
atggaggcggtcactctcatttctcacgccgctcagtccaggctgcgctccatgctggag
aaagtctcggccgttgcgcaacaccgcgtcgactcctgcaaagatgaggagctgtacgag
cagacatcagatgtgcggacccagctgaagttctttgagcagctggagaagattgagaag
cagaggaaagatgatgaagaacgggagctgctaatgaaagccgcaaaaagtcgctcgaag
caggaggatcccgaacaggctcggcttaaacagaaagctaaagagatgcagcagcaggaa
ctcgcccagatgagacagcgggatgccaacctcacagccctagccgccatcggaccccgc
aagaaacgcaagcttgactctcctggggcctcagcaggtgcagagtttcctgcaggctcc
tccggatcagcgactgcttctacctcatcctccacatcgtcagtccggcagacccggcag
cgcgtcacccgggtcaacctcagggacttgatcttctgcttggagcaggagcgaaccaca
gccaggtccatgctgctctacaaggcccttctgaagtag
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