Sinocyclocheilus rhinocerous: 107716875 Help Entry 107716875         CDS       T04916                                  Symbol ccdc88a Name (RefSeq) LOW QUALITY PROTEIN: girdin   KO K25392   girdin Organism srx  Sinocyclocheilus rhinocerous Brite KEGG Orthology (KO) [BR:srx00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:srx03037]     107716875 (ccdc88a) Cilium and associated proteins [BR:srx03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    107716875 (ccdc88a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N GAS KASH_CCD DUF4472 GARS_C Motif Other DBs NCBI-GeneID:  107716875 NCBI-ProteinID:  XP_016378966 LinkDB All DBs Position Unknown AA seq 1785 aa AA seqDB search AAVFQETLQQLVVMSLPDVLVLGRTPLSEQGLEEMRKILLLLLGCAVQCNMKEEYIDRIQ MLDFDTQAAIAAHIQEVTHNQENVFDLQCVEESESVPHDKDIVFRQLTFNLKRLVYERDQ HAEVTHTHTLAAAVARIRRLRQELEEKTEQLLDCRQELEHMETEVKRLQQENLQLLCDAR SLRAYRDELDALREKAVRVDKLESEVTRYKEKLHDIEFYRTRVEELKEDYQVLLETKGML EDQLESFRARSDKHHELEKENLQLKNKVHDMEMERDMDRKRLEELLEENLTLAVAQKQSM DESLHLGWELEQLSKTTPELSEVPQKSLGHEVNELTSSQLLKLEKENQMLLKSVEELKAS SESGARLRLEKRNQKLSQQLEQLQAELAADRESLRSAESLSADLLKEKAQLEKTLETLQQ NSDRQVHRTLSGQDLQSEYKGRCVFAQLEQLQAELAADRESLRSAESLSADLLKEKAQLE KTLETLQQNSDRQVKGLEQENDHLNQTIASLRQRSQVSAEARVKDIEKENRVLHESIKET SSKLNKIEFERKQLRKDLEHYKEKGERAEELEMEVHRLEREKESLQKRLAALAITCGKVE VLEKENAELEAESRKLKKAADGLRNVSYQLEVLEKENAQLDEENLELRRMVQSLRSCGAK AAQLELENKELENERTQLKKSLELLKASSKKNERLEVSYQSLDAENQRLQKALETGSRKI QQLEGELQDTEVENQSLQQSLEELKISSKGLEQLAQENTALEQENSQLEKDKKQLEKENK RLRQQAEIKDSRLDEDNLRISHLEKENRTLGKEVAALKDMCGRVKDLEKDNKELVKQATI DKKTLVTLREELVNEKLKTQQINNDLEKLTHELEKIGLNKEGLLGDAESSDDRFKLLECK LESTLKSSLEIKAEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQRQEEECSAQSS PARGREDTQSKWEKQSQEATRELLKVKDRLIEVERNNATLHAEKQALRTQLKQLESQSGN LQAQILALQRQTASLQENNTTLQTQNANLQVENSTLNSRSAALMSQNAQLQTQQSGTESE RDVAIREKEELRTVYDLLLHDHEKLSALHERQASEYEDLIGKHGELKSGHKSLELQHRSL ENRYNQLLKQKTELEQLERDLTAEREKMISDSKSHQDTAAQYQRLSEEHHTLSSTHQQLL KDNELLQTDHKTLKSQLNTARLEQTRLEAEFSKLKEQYQQLDITSAKLTNQCELLSQLKG NLEEENRHLLDQIQTXLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMD QYKFYDPSPPRRRGNWITLKMRKLIKPKSRERMRSLTQTPPRSESSEGFLTLPQPDSQDS SSVGSGSNSLEDNLTHRSGRKRVEKSQTQASSNALKKLPFMRNRSKEKDRVKAVYRRSMS MNDLLQTMAVSEGQWSSSTDHLEAQHGKEFGSMDSAGLSLSRGPSARHRSDTGAAVSSED VTQLSEQERAQGVMNGSASRPRSESSDVSVSRDSPTSQTSAQHSALEGKRRAKSAGSEVV SLQQFLKESTEPAESSGVSGAVPRVKSRGILRSASGKAPAGAGQPGHPSLRKAESTRSKV SPQAGLSAQSKASSASLSERLDSSSGLPRASSVISTAEGSVRRTSIHELLSKDSRQPVLV DPAPSRSQSEYSDPALHKSASMPCRVQEPELSSLQAFLGPSFTVDSIFLDSIFSEPAVTG GARNQAILSLNTSLVSSISGPPHKAKRSDEPEEDGQSLWYEYGCV NT seq 5358 nt NT seq  +upstreamnt  +downstreamnt gctgctgtgttccaggagacgctgcagcagctggtggtgatgtcacttcctgacgtgctg gtgctgggccggactcctctgagcgagcaaggactggaggagatgaggaagatcctgctg ctgctgctgggctgtgctgtacagtgtaacatgaaggaagaatacatcgaccggatccag atgctggactttgacacgcaggcagccatcgccgctcacattcaggaggtgacacataac caggagaacgtgtttgaccttcagtgtgtggaggagagcgagtctgtcccgcacgataaa gacatcgtcttcagacagctgacctttaacctcaagcgcctcgtctacgagagagaccaa catgctgaggtaacacacacacacacgctcgctgctgctgtggccaggatcagacgcctg cggcaggagctagaggagaagactgagcagctgctggactgcagacaggagctggagcac atggagacagaggtcaagagactgcagcaggaaaacctgcagttgctgtgtgacgcgcgg tcgctgcgggcgtatcgtgacgagctggatgctctcagagagaaggccgtcagggtggac aaactggagagtgaagtgacgcgctacaaagagaaactccatgacattgagttctacagg accagagtggaggaactgaaagaggactatcaggttctcctggagaccaagggcatgctg gaggatcagctggagtcattcagagctcgatctgataaacatcatgagctggagaaggaa aatctgcagcttaaaaacaaggtccatgacatggagatggagcgagacatggaccggaag cgcttggaggagctgctggaggagaacctgacgctagcggtggcccagaaacagagcatg gacgagtctctgcatctgggctgggaactggagcagctctccaagaccactcccgagctc agtgaagtgccgcagaagtctctgggtcacgaggtgaacgagctgacgtccagtcagctg ctgaagctggagaaggagaatcagatgctgctgaagagcgtggaggaactgaaggcctcc agtgagagcggcgcgcgcctccgtctggagaaacgcaaccagaaactcagccagcagctg gagcagctgcaggcggagctggctgcagacagagagagtctgcgcagcgctgagagtctg agcgcagacctgctgaaggagaaggcgcagctggagaaaaccctggagacgctccagcag aactcagacagacaggtacaccgcactctcagtggacaagatctgcagagcgagtacaaa ggccggtgtgtgtttgcgcagctggagcagctgcaggcggagctggctgcagacagagag agtctgcgcagcgctgagagtctgagcgcagacctgctgaaggagaaggcgcagctggag aaaaccctggagacgctccagcagaactcagacagacaggtcaagggtctggaacaggag aacgatcatctgaaccagaccatcgcctctctcaggcagcgctctcaggtcagcgctgaa gcccgcgtcaaagacatcgagaaagaaaaccgcgtgctgcacgagtccatcaaagagacc agcagcaagctcaacaagatagagtttgagcgcaaacagcttcgcaaagacctggagcac tacaaagagaaaggagaaagagccgaggagctggagatggaggtccatcgactggagcga gagaaggagagtctgcagaagcgtctcgctgctctcgccatcacctgcgggaaggtggag gtgctggagaaggagaatgccgagctggaagcggagagcaggaagctgaagaaagcagcg gacggtctgaggaacgtttcctatcagctggaggtcctggagaaggagaacgctcagctg gacgaagaaaacctggagctccggcgcatggtgcagtctttacggtcctgcggagccaag gctgcccagctggagctggagaacaaagagctggagaatgagagaacccaactcaaaaag agtctcgagctgctgaaggcttcgtccaaaaaaaacgagcgtctggaagtcagttaccaa agcctcgacgcggagaaccagcggctccagaaagccctggagaccggcagccgcaaaatt cagcagctggagggagagctgcaggacacggaggtggagaaccagagcctgcagcagagt ctggaggagctgaagatctccagcaaaggcctggagcagctggcgcaggagaacacggcc ctggagcaggagaacagtcagctggagaaggacaagaagcagctggagaaggagaacaaa cggctgcgacagcaggctgaaatcaaagactccagactcgatgaagacaacctgcgcatc tctcatctcgagaaggagaaccgcacgctgggcaaggaggtcgccgctctcaaagatatg tgtggtcgcgtgaaagacttggagaaggacaataaggaactggtcaaacaagcaaccata gacaagaagaccctggtcactctgagagaggagcttgtcaatgaaaaattaaagacccag cagattaacaatgacctggagaagctgacccatgagcttgagaagatcggcctcaataaa gaggggcttctgggtgatgcagagagctctgatgacaggtttaagcttctagagtgtaaa ctggagtccactctgaagtcctctctggagatcaaagcggagaagatcgctgctctagaa gcccgactgcaggagtcctccaacctcaaccagcagctacgacaggagctcaaaacggtg aagaagaactacgaggccctgcgccagcgtcaggaggaggagtgttcggctcagagctcg cctgctcgaggacgggaggacacacagagcaagtgggagaagcagagtcaggaggccacg cgagagcttctgaaggtcaaagaccgactcatagaggtggagagaaacaacgccactctc cacgcagagaagcaggctctccggacgcagctgaagcagctggagtctcagagcgggaat ctccaggcgcagatattagctcttcagagacagaccgcatctctacaggagaacaacacc acgctacaaacacaaaacgccaatctacaggtggagaactcgacgctgaactctcggagc gccgctctcatgtcccagaatgctcagctgcagacgcagcagtccggcacagagagcgag agggacgtggccatacgagagaaggaggaactgcgcacggtgtacgatctactgctgcat gaccacgagaagctgtctgcgctgcacgagagacaggcgtcggagtacgaggatctgatc ggcaaacacggagagctgaagagcggccacaagagcctggagctgcagcaccgcagcctg gagaacaggtacaatcagctgctgaagcagaagaccgaactggagcagctggagagagat ctcacagcagagcgagagaagatgatctctgacagcaagagtcatcaggacacagctgca cagtaccagaggctcagcgaggagcaccacacgctgagctccacacaccagcagctcctg aaggacaatgagcttctgcagacagatcataagactcttaagagtcagctgaacacggcc cggctggagcagacgcgtctggaggcagagttctccaaactcaaggaacagtaccagcag ctggacataacctctgccaaactcaccaaccagtgcgagttgttaagtcagctgaagggg aacctagaggaagagaaccggcatttgctggatcagatccagaccnctctgcagaaccgg accctgctggagcagaccatggagagcaaagacctgttccacgtcgagcagagacaatac attgataaactcaatgaactgaggagacagaaagagaagcttgaggagaagattatggat cagtataaattttatgacccgtcacctccgcgaaggaggggcaactggatcacactgaag atgaggaagctcatcaagccaaagagtcgtgagcgcatgcgctctctcacacagactcct ccccgctccgagtccagcgaagggttcctgacgctgccgcagccggacagtcaggacagc tcgtccgtcggctctggatccaactcactggaggacaatctcacccaccgcagcggcagg aagagagttgagaaaagccaaacgcaggcttcctctaacgcgctgaaaaagcttccgttc atgaggaaccgatccaaggagaaagaccgagtgaaggccgtctaccgccgctctatgtcc atgaacgacctgctgcagacgatggctgtgtccgagggtcagtggtccagcagcacggat catctcgaagctcagcacgggaaggagtttggatccatggactccgccggcctgagcctg agccgcggccccagcgctcgccaccgctccgacacaggcgcagccgtgtccagtgaagac gtcacgcagctgtcggagcaggagcgagctcagggcgtgatgaacggcagtgcgagtcgg cctcgcagcgagagcagtgacgtcagtgtgagtcgggacagtcccaccagccagacctca gcacagcacagcgctctggagggcaaacgcagggccaagtctgcaggaagtgaggtggtt tccctgcagcagttcctgaaggagagcacagagccagcagagtcgtctggtgtgtccgga gccgtgccgcgtgtgaagagccgaggcatcctgcgctcagccagcggtaaggcccctgcg ggagccggtcagccgggccaccccagcctgcgcaaggcagagagcacgcggtccaaggtc tcgccccaagccggcctgtctgcgcagagcaaagcctcatcagcatctctgtcggagcgt ctggactcgtcctcaggcctgccccgcgccagcagcgtcatctccaccgccgagggctcc gtgcgccgcaccagcatccatgagctgctctccaaggacagccggcagcccgtgctggtg gaccccgcgccctcccgctcccagagtgagtacagcgacccagccctgcacaagtctgct agcatgccctgccgcgtacaggagcccgagctgtccagcctgcaggcctttctaggtccc tccttcaccgtagactccatctttctggactccatctttagcgagccagcggtgacgggt ggtgctagaaaccaggccatcctgtccctcaacacgtctctcgttagtagcattagcggc cctccccataaggccaagcgctcagacgagcccgaggaggacggccagtcgctgtggtac gagtacggctgcgtgtga

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