Sinocyclocheilus rhinocerous: 107716877
Help
Entry
107716877 CDS
T04916
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107716877 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107716877 (pnpt1)
03016 Transfer RNA biogenesis [BR:
srx03016
]
107716877 (pnpt1)
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
107716877 (pnpt1)
Messenger RNA biogenesis [BR:
srx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
107716877 (pnpt1)
Transfer RNA biogenesis [BR:
srx03016
]
Prokaryotic type
tRNA degradation factors
107716877 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
S1_2
Motif
Other DBs
NCBI-GeneID:
107716877
NCBI-ProteinID:
XP_016378969
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MKLLGETSVMVTAVSKTKPAAAQFMPLVVDYRQKSRMLVMRSCLMLCVCVCADRSIRPLF
PAGYFYDTQVLCNILAADGVNDPDILAINGASAALALSDIPWNGPIGAVRVGLVDGEFLI
NPTRSEMSGSKLNLVIAGAPSSQVVMMEAAAENVLQQDFSHAVKLGVKHTQQIILAIQQM
SRDMKISKRSPARLFTASAEMLDYTCQLASDKIYAVFTDFTHDKISRDEAINKIRLEAEE
HIRERFPQSESFEVVEAFNSVSREVFRNLVLSEYRRCDGRDLTSLRNISCEVDVFKPLHG
SALFQRGQTQVLCSVTFDSLESSMKSDAISTALSGVKDKNFMLHYEFPPYATNEIGKMGG
ANRRELGHGALAEKALRPVVPPDFPFTIRVTSEVLESNGSSSMASVCGGSLALMDAGVPM
SSAVAGVAIGLISKAHPEKASEIQDYRLLTDILGIEDYNGDMDFKMAGSSKGITALQRST
HLVQTACVCVCVCVRVGVCVCVMKLCSCSLAGVTISQVDEETFSVFAPTPGAMSEAQELI
RAVCRDDQEQQLEFGAVYTATVTEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALG
LEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPAAAAVRSLSDRHSISVGASGEQSPDS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgggtgagacgtcagtgatggtgaccgcggtcagtaagaccaaaccggcc
gccgctcagttcatgccgctcgtggtggattacaggcagaaatctcgtatgttagtaatg
cgctcctgtctgatgctgtgtgtgtgtgtttgtgcagatcgctccatcaggccgctgttt
cccgccggatacttctacgacacacaggtgctgtgcaacatcttagccgcagatggagtc
aacgaccctgacattctggccatcaatggagcgtctgcggctctggctctgtctgatatc
ccctggaacggacccatcggagcggtgcgtgtgggcctcgtggacggagagttcctcatc
aaccccacgcgctcagagatgagcggcagcaaactcaacctggtgatcgccggagccccg
tccagccaagtggtaatgatggaggcggcggcggagaacgtcctgcagcaggacttcagt
cacgcggtgaagctcggcgtcaagcacacgcagcagatcatcctggccatccagcagatg
agcagagacatgaagatcagcaaacgctctcctgccagactcttcaccgcctccgccgag
atgctggactacacatgccagttggcgtctgataagatctacgctgtatttacagacttc
acacacgacaagatctcccgagatgaagcgatcaataagatccgtctggaggcggaggag
cacatcagagagaggttcccgcagtcagagtccttcgaggtggtggaggccttcaacagc
gtctccagagaggtcttcaggaatctggttctcagtgaatacaggcggtgtgacggcaga
gatctgacgtctctgcgcaacatttcctgcgaggtggacgtcttcaagcctctccacggc
tcggctctcttccagagggggcagacacaggtgctgtgctccgtcacgtttgactctctg
gagtccagtatgaaatcagacgcgatatccaccgcgctcagtggcgtcaaagacaagaac
ttcatgctgcactatgaatttcctccgtatgccaccaatgagatcgggaagatgggagga
gcgaaccggcgggagctgggtcacggagcgctggcggagaaggcgctgaggcccgtcgtt
cctccagatttccccttcaccatccgcgtcacgtctgaggtgctggagtccaacggctcg
tcctccatggcctcggtgtgtggcggcagtttagcgctcatggatgcaggtgtgcccatg
tcctccgctgtagccggagtcgccatcggcctcatatctaaagcccatcctgagaaagcg
tcagagatccaggactacaggctgctgaccgatattctgggaatagaggactacaacgga
gacatggacttcaagatggcaggcagcagtaaagggatcacggctctgcagcgaagcaca
cacttggttcagacggcgtgcgtgtgtgtgtgtgtgtgtgtgcgagtgggtgtgtgtgtg
tgtgtgatgaagctctgctcttgctctctggcaggtgtgaccatctctcaggtggatgag
gagacgttctctgtgtttgctccgacgcccggcgccatgagtgaagcgcaggagttgatc
cgagctgtctgcagagatgatcaggagcagcagctggagttcggagccgtgtacacagcc
accgtcacagagatcagggacatcggcgtgatggtgaagctctatcccaacatgagcgct
gtgctcctgcacaactcccagctggaccacaagcggatcaagcaccccagcgctctagga
ctggaggtcgggcagcagatccaggtgaagtatttcggccgcgaccccacggatggcagg
atgaggctgtctcgtaaggtgctgcaatctccggcggcggcggcggtgaggagtctgagc
gacagacacagcatctctgtaggagcgtccggagagcagagcccagactcatag
DBGET
integrated database retrieval system
