Sinocyclocheilus rhinocerous: 107716948
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Entry
107716948 CDS
T04916
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107716948
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107716948
Enzymes [BR:
srx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107716948
Protein phosphatases and associated proteins [BR:
srx01009
]
HAD phosphatases
Fcp/Scp phosphatases
107716948
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107716948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
107716948
NCBI-ProteinID:
XP_016379069
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MDATGKIRASKSKKKGGKGTQVISAADEARKREAIKVALRQKLDLERKALQVVERLLEDS
VTEEFLIDCAWHITPANYKDTVEERCIAKLCGYPRCPNKLTNIPTQQFKISTKTNRVYDI
TERKCFCSNFCYKASKCFELQISKTPLWLRKEERPPEVKLMNEGEGGSSGQEIKLVDKPV
TETDIENPVPDVPESHKDSPPFNQSDNSDTEQDFVSSVVSRQHKHTRVHWGKLPKRDGVS
EDRLSAENERYAHPGPTQTLDGENNDESGSSKTPQPQTDPTACLSIPNKTTSAGSDVEGT
LELLNQCSLKDTATQQETNLPSQSEIGNSTPPTSGLNITQVSMSKRGAAGLKGLLKDHNK
AKTTPTTISLCLLEHLRQTFMEWRTEETMKFLYGPDYASGTEVSAQEVEELDEDDLDEAE
VEVSLRQNSGSSSRPSASAPDFETLQKETELLELRVREFYKGTYVLPEEVKTDAIKNTQD
TQDSGKDPPLPLVDSHAQHLIQKRIAVEKLSQSLRDAVGTLRLTMSDVINDINNLVRTFR
FTNTNIIHKRPEWTLIAVVLLSVTKWVSRLLPTRVESQQIYLLDVKQIFRLLKLITTAWL
LSIFSCMGKCHMCWYLP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacaggaaagattcgagcctcgaaatcaaagaagaaagggggcaaaggaacc
caggtgatttcagcagcggatgaggcgagaaagagggaagctattaaagtggcgctcaga
cagaagctagatttggagcgcaaagccctgcaggtagttgagcggctgctggaggacagt
gtgacagaggagttcctcatcgactgtgcatggcacatcactcctgccaactacaaagac
acagtggaagaaaggtgcattgctaaactgtgtggatatcctaggtgtccaaataaacta
actaacatacccactcaacagtttaaaatatccaccaaaacgaacagagtctatgatatt
acagagcgcaagtgtttttgcagtaatttctgctacaaagcctccaaatgttttgagctc
cagatatcaaaaacaccactttggcttagaaaggaggagaggcctccagaagttaagctg
atgaacgaaggagagggaggcagctctggacaggaaataaagttggtagacaagcctgtg
acagaaactgacattgagaatcctgtcccagacgttcctgaatctcacaaggactcccct
cccttcaaccagagcgacaacagtgacactgagcaagactttgtctccagtgtggtgtcc
agacagcataaacacacgagggtacactggggaaaactgccaaagagggacggagtgagt
gaggacaggttgagtgctgaaaatgagcgatatgcacatcctggaccaacacaaacactc
gatggagaaaataatgatgaaagtggatcttcaaaaactcctcaaccacagacggaccca
actgcctgtctgtctataccaaataaaaccacatctgctggatctgatgttgaaggaact
ctggagcttttgaatcagtgtagtctgaaggacactgcaacccaacaggaaactaacctt
ccttcacagtctgagattggaaactccacccctcccactagtggtctgaacatcactcag
gtgagcatgagtaagagaggagctgcaggcctcaaaggcttgttgaaggaccataacaaa
gctaaaacaactcctacaaccatcagtttgtgcctgctagagcatctacgacaaactttt
atggagtggagaactgaggaaaccatgaagtttctttatgggcctgattatgcctctgga
acagaggtttctgcacaggaagtggaggaactggatgaagatgacctggatgaggctgag
gtggaagtgagcttgagacagaacagtggaagttcttccagacccagtgcttcagctcct
gattttgaaacacttcagaaggagacagagttgctggagctgagagtgagagagttttat
aaaggaacgtatgttctacctgaagaggtcaagacagatgccatcaaaaacactcaagac
acacaggacagtgggaaggaccctcctctgcccttggttgattctcatgcacagcatctg
attcagaaacgcattgctgtggagaagctcagccagagcttgagagatgctgtgggaacc
ctgcgtctaacgatgagtgatgtaatcaatgacataaataatttggtcaggacattcagg
tttacaaacactaatatcattcacaaaaggccagaatggactttaattgctgtggttctt
ctgtcagtaactaaatgggtgtccagattacttccaaccagagtcgagtcacaacaaatt
tatcttttagatgtcaaacagatctttagattgcttaagctaattactactgcatggctt
ttgtccattttctcatgcatgggaaagtgccacatgtgttggtatttgccatga
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