Sinocyclocheilus rhinocerous: 107716963
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Entry
107716963 CDS
T04916
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04810
Regulation of actin cytoskeleton
srx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107716963
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107716963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107716963
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107716963
Factors involved in mRNA localization
Other mRNA localization factors
107716963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
107716963
NCBI-ProteinID:
XP_016379090
UniProt:
A0A673G3G9
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSLIYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVISGYDELLAD
IVNLCVDYYENKMYLTPNEKHMLLKVMGFGLYLMDGTNSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWSCMSAGSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLALQGLQLLSQWSAQVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKRKKNVIQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSVPWILTDHILEAKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRAECKNQGANISWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRVSSALYKSL
ELAINRFESEDLTSIMELEGLLDINRMTHKLLGKYLTLDSIDTMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
VYSLYRNFLGPPHIKAICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSIFEVILTRIRGNLDDPIWRGPLPSNGVMHVDECMEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQHRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKFQVLNDEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagtgactctggaagatgctctgtccaatgtggacctgctggaggagctg
ccgttaccagatcagcagccctgcattgagcctctgccctcctccctcatttaccagccc
aacttcaacaccaactttgaggaccgcaatgcttttgtgacaggcatcgcccgttacatt
gagcaggccaccgtccactccagcatgaatgagatgttagaggaaggacaggagtatgcc
gttatgctgtatacctggaggagctgttcaagagctattcctcaggtgaaatgtaatgaa
cagcccaacagggtggagatctatgagaagacagtagaggtgcttgagcctgaagtcact
aaactaatgaacttcatgtactttcagaggacagcaatagatcgcttctgcggggaagtg
cgtcgactgtgtcacgccgagcggaggaaggactttgtgtctgaagcctatctgctcacg
ctggggaagttcatcaacatgtttgccgtgctggacgaacttaagaacatgaagtgcagt
gtcaaaaacgatcactccgcctacaagagagctgcccagttcctgaggaaaatgtcagag
ccatcctccattcaggaatctcagaacttatccatgttcctggccaaccataacaagata
actcagtccctacagcagcagcttgaggtgattagcggatatgatgagctgttggcagac
attgttaacctgtgtgtggattactacgaaaacaagatgtatctcacccccaatgagaaa
cacatgctactcaaagtgatgggctttggtctttatctcatggatggaaccaacagcaac
atctacaaactggatgccaagaagagaatcaacctcacgaaaattgacaagtttttcaag
caattgcaggtagtgcctctgtttggtgacatgcagattgagctggcccgctatatcaaa
accagcgctcactatgaggaaaacaaatccaggtggtcgtgcatgtctgcaggcagtagc
ccacagtataatatctgcgagcagatgattcaaatccgtgaagaccacatgcgtttcatt
tctgagctggctcgctacagcaacagtgaggtagtgacgggctcagggcgtcaggaggct
cagaagacggactctgaatacaggaagctgtttgatctggctctgcagggtctgcagctg
ctctctcagtggagcgctcaggtcatggaagtgtattcctggaagttggtgcaccccaca
gataaatactccaacaaagaatgcccagacaatgctgaggagtatgaacgtgccactaga
tacaactacaccagcgaagagaaatttgctctggtggaggtcatcgccatgataaagggc
ctgcaggtgctgatgggccgtatggagagcgtgttcaaccacgccatccgtcacaccatc
tatgcagctctgcaagactttgcccaggtaacgctcagagaaccgctgcgtcaggccatc
aagaggaagaagaacgtcatccagagcgtcctccaggccatccgtaagaccatctgtgat
tgggagactggcagagagccacataatgacccagcactgcggggcgagaaggaccctaaa
gggggatttgatatcaaagttcctcgtcgtgccgtaggaccctccagcactcaactgtat
atggtcaggacaatgctggagtctctggtcgctgataagagcggctcaaagaagactctg
cgcagtagtttggagggtccgaccatcctggacatcgagaagttccatcgcgaatcattc
ttctacactcacctgctcaatttcagtgagacgctgcagcagtgctgtgatttgtcccag
ctctggttccgtgagttctttctggagctcacaatgggtcgccgcattcagttcccaatt
gagatgtccgtgccctggatccttaccgaccacatcctggaggctaaagaggcctctatg
atggagtatgtgttatattcattggatctgtacaacgacagcgcacactacgctctcaca
aagtttaaaaagcagttcctttatgatgagattgaagctgaggtgaacctttgctttgat
cagtttgtctacaaacttgctgatcaaatttttgcctactacaagattcttgctggaagc
ctccttctggataagagactaagagctgaatgtaagaatcagggcgccaacatctcatgg
ccttcctccaatcgttacgagacgcttctcaaacagagacatgtccagctccttggacga
tcgattgacttgaaccgtctgatcacccagcgagtgtcttcagcactgtacaaatcccta
gagctcgccatcaaccgctttgagagcgaggacctcacttccatcatggagttggagggt
ttgttggatattaaccggatgacccataagctcctcggtaagtatttgacactggatagt
atcgacaccatgttccgtgaggcaaaccacaacgtatccgcgccctatggcagaatcact
ctccatgtcttctgggaactcaactatgacttcttgcccaactactgttacaatggctcc
acgaacaggtttgttcgcactgtgctgccattttcacaagagtttcagagagacaagcct
cccaacgcccagccacagtacctatatggctcaaaggccttgaatttggcgtacagtagc
gtatacagcctctaccggaacttcctgggacctccacatatcaaggctatttgcagactt
ctaggataccagggcatcgctgtggtgatggaagagctgttaaaggtcgtcaaaagcctg
cttcagggcaccattctgcagtatgtgaagaccctgatggaagtgatgcccaagatatgc
cgtctgcctcgccacgagtacggctcgccaggtattctggagttcttccaccaccagttg
aaggacattgtggagtatgctgagctgaagaccgtgtgcttccagaacctgagggaagtt
ggaaatgctttgctcttctgccttctgagtgaacagagcttgtctcaagaggaggtgtgt
gacttgttgcatgcagcaccattccagaacatcttgccaagagttcacgttaaagaaggt
gagcgtctggatgcaaagatgaagcgtttggaggccaaatacactgcactgcatttggtg
cctctaattgagcgtctgggaacccctcagcaaattgccatcgcccgtgagggtgacctg
ctgactaaagagcgcctgtgctgcggcctctccatattcgaggtcattttgactcgcatc
cgcggtaatctggacgacccaatctggcgcggcccgttgcccagcaacggcgtgatgcac
gtggacgaatgcatggagttccacaggttgtggagtgcaatgcagtttgtgtactgcatc
ccggtgggagcacacgagttcactgttgagcaatgttttggagatggtctgaactgggct
ggttgcatgattatcacattgcttggacagcacagacgctttgatatcctggacttcagc
taccatctccttaaggtgcagaaacatgacggcaaagatgagatcatcaagagcgtgcct
ctaaagaaaatggttgaccgaattcgcaagttccaggttctgaatgatgaaatcttcgcc
attttgaacaagtacctgaagtctggggatggagagaacatgccagtagaacatgtccgt
tgcttccagcctccgatccatcagtccttggccagtaactga
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