Sinocyclocheilus rhinocerous: 107717405
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Entry
107717405 CDS
T04916
Symbol
syvn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04120
Ubiquitin mediated proteolysis
srx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107717405 (syvn1)
04120 Ubiquitin mediated proteolysis
107717405 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107717405 (syvn1)
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107717405 (syvn1)
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107717405 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
zf-Nse
zf-RING_Vps41
FANCL_C
Motif
Other DBs
NCBI-GeneID:
107717405
NCBI-ProteinID:
XP_016379626
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MVRAALATGTSLVLTGAVVAHAYFMKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLAVLDFLFVNHSCHSIITRGASVQLVFGFEYAI
LMTMVLTTFVKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLXVSLWTTDNVCIICREEMVTGAKKL
PCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPAPAAPANAPVPPPV
NVAPGMMPQFPPGLFPFWGPFPGAPPPAAPGAQAATDAPQTSTAATQAQGAESGASSSTQ
PNADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSEAELREL
EQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNAGETSTSVNVESS
SSTGNTETPSQENEAQSDGSVNGATGFSPPDSTTGVDKDRKEGDEDEDDGEPNAAELRRR
RLRKLETTNTPDH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgcaacaggcaccagtttggtgctgactggcgcagtggttgct
catgcctacttcatgaagcaccagttctaccccactgtggtatacctcactaaaagcagt
cctagcatggcagttttatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaggtcttttttgggcaactgagagctgctgaaatggagcacctgattgaacgc
tcctggtacgcggtgaccgagacctgtttagcctttacagtcttcagggatgatttctct
cctcgctttgtggcccttttcactttgctgcttttcctcaagtgtttccactggctggct
gaagacagagtggactttatggaaaggagtccaaatatctcatgggtctttcacttcaga
gttctctctctgatggtgttgctggcagtgttagactttctgtttgtcaatcattcgtgt
cacagcattataacaagaggagcgtcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcgtcaagtacaccttgcatacagttgatctgcag
agtgagaatccatgggacaataaggccgtctacatgctctacacagagctctttacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccataatgataaaagtgcacaccttc
cctctgtttgccattcgacccatgtatctcgcaatgcggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctgtgagtatctctctgg
accaccgacaatgtgtgcatcatttgcagagaagagatggtgactggagccaagaaactg
ccgtgcaaccacatctttcactcaagttgccttcgctcatggttccaaagacagcagacg
tgtccgacgtgtcgtatggatgtcctccgagcgtcccagccaaaccagactcctgcccca
gctcctgcacaagcacctgcccctgctgctcctgctaatgcccccgtacctccacctgtc
aatgttgctccaggtatgatgcctcagtttcctcctggtctgtttcccttttggggtccc
ttcccaggcgcgcctcctcctgctgctccaggtgcacaggcagctactgacgctccacag
accagcaccgctgcaacacaggcccagggagcagaatcaggagccagcagctcgacccag
ccgaatgcagacagtgcctctgctgctcccggagcaatgcctggattccccttctccatg
cctccacctttcccatcagctccatggctgccgatgcctccacctccaccctttatgtca
tccatgccaccgccaccatcgactctgtccaccatgtcagaggccgagctcagagaactg
gagcaggagggcaggcggggtttggaagccaggttgcagtgccttcacaacatccacaca
ttgctggatgccgccatgctcaacattcatcactacctcagcacggtggctacattaagt
cctccaagatcagaaaccaacgctggtgagacgagtacatcagtgaatgtggagtcctct
tcctccacgggcaacacggaaactcccagtcaggagaacgaggctcagagcgatggatct
gtaaatggagctacaggcttttctccaccagactcaaccacaggagtggacaaagacagg
aaggagggggatgaagatgaggatgacggtgagccaaatgccgccgagttgagacgacgt
cgcctgcgtaaactggagaccactaatacacctgaccactga
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