Sinocyclocheilus rhinocerous: 107717625
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Entry
107717625 CDS
T04916
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107717625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107717625
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107717625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
107717625
NCBI-ProteinID:
XP_016379921
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MSTETPSDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLNKNMLLYFSFADYEESRMKHEKVH
SIYNRLLAIEDINPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVTAALMEY
YCSKDTPVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPDK
SGEIWARFLAFESNIGDLASILKVERRRFMAFKDEYEGKETALLVDRYKFMDLYPCSPSE
LKALGYKDVSRAKYASLMPEAVVTPSTPSLKDEADRKPEYPKPDTSQMIPFQPRHLAREY
KHLTYI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaaactccatcggaccaggcggcggagtacatcccagagaaggtgaagaaa
gcagagaagaagttggaagaaaatccgtatgacctcgacgcttggagcatactgattcgt
gaagcacagaatcaacccatagacaaagcaaggaagacatatgagcgacttgtcgcccag
tttcccagttcgggcagattctggaagctatacattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttaatgaaggttctgcacattgacctg
tggaagtgctacctctcatatgtacgggaaaccaaaggaaaactgcccagctataaggaa
aagatggcacaggcttatgattttgctttggataagattgggatggagattatgtcctat
cagatttgggtggattacatcaatttcctcaagggagtagaggccgtggggtcatacgct
gagaaccagcgtatcacagccgtcagacgtgtgtatcagagaggctgcgtcaaccccatg
attaacattgagcagctctggagggactacagcaagtatgaagagggcataaatgtgcat
ttggccaaaaagatgattgaagaccggagtagagactacatgaacgccaggagagtcgcc
aaggagtatgagacggtgatgaagggtttggaccggaacgccccctcagtgccgccccag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggagaag
agcaacccactgcgtaccgaagaccagaccctcatcaccaagagagtgatgtttgcctat
gagcagtgccttttggtactcggccatcaccctgacatctggtacgaagctgcccagtat
ctggaacagtccagcaaactgctggcagaaaaaggggacatgaacaacgccaagctgttc
agtgatgaggcggctaacatctacgagcgtgccataggaactctgctcaacaagaacatg
ctactgtatttctcttttgcagattatgaagagagtcgcatgaagcacgagaaggttcat
agtatatacaaccgcctcctggccatagaagatatcaaccctactttggtctatatccag
tacatgaaatttgccagaagagctgaaggcatcaagtctggtcgcaccatctttaagaag
gccagagaggatgctcgcacacgccatcatgtgtacgtcactgctgctcttatggaatat
tactgcagcaaggacacacctgtggcctttaagatatttgagcttggactgaagaaatac
ggtgacattcctgaatacattttggcgtacattgattacctctctcacttaaacgaggac
aacaacaccagagtcctgtttgagagagtcctgacgtccggcagtctttcccctgacaaa
tctggggaaatctgggcgcgcttcttggcctttgagagcaacatcggggacttggccagt
atcctgaaggtggagcgaaggcgtttcatggcctttaaagatgagtatgagggaaaggag
acggctctgctggtggacagatacaagttcatggatttgtatccctgctcccccagcgag
ctcaaagccctcggctacaaggacgtgtctcgtgccaaatacgcatcactgatgccagag
gcggtggtcactccttctaccccttcgctgaaagacgaggccgaccgcaaacctgagtat
cccaaacctgacaccagccagatgatccctttccagccacgtcatctggcgcgtgagtat
aaacacctcacatacatttaa
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