Sinocyclocheilus rhinocerous: 107718482
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Entry
107718482 CDS
T04916
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107718482
Transcription factors [BR:
srx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107718482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Peripla_BP_4
Motif
Other DBs
NCBI-GeneID:
107718482
NCBI-ProteinID:
XP_016381060
UniProt:
A0A673GWU2
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNTGHTGPNGGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSETEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAGPGGGGGLGLAMGAAGVGQRLDSPVGHGGNTAASYAHMNGWTNGAYSGQVA
AAAAAAAMMQEAQLAYSQHPGSGAHHHHGHHHHPHNPQPMHRYEMTALQYSPISNSQSYM
SASPSGYGGISYTQHQNSSLASSGAIGTLGSLVKSEPSVSPPITAHSRAPCPGDLREMIS
MYLPTAEAGDPSVQSRLHAVPQHYQSSTTSVNGTVPLTHI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttgcattccccgggaccccagactaacacaaac
acgggccacacgggacccaacggcggcagcaaagttaaccaagaccgtgtcaagagacct
atgaatgcgtttatggtgtggtctcggggtcagcgcagaaaaatggctcaggagaatcca
aagatgcacaactcggagatcagtaagcgcctcggagcagagtggaaagtcatgtccgag
acggaaaagcgacccttcattgacgaggcgaaaagactgcgtgccatgcacatgaaggag
catccggattacaagtaccgaccccggaggaagaccaagacgctgctcaagaaggacaag
tactctttggcgggtggcctgctcgctggaccaggtggcggaggcggcttggggctggca
atgggtgcagcgggggtcgggcagaggttagacagtccggtgggtcacggcggcaacacc
gcggcgagctacgcgcacatgaacggctggaccaacggggcgtactcggggcaggtagcg
gccgccgcggctgcagccgcaatgatgcaggaggcgcagctcgcctacagtcagcacccg
ggcagcggagcgcatcaccaccacggacaccatcaccatccgcataatccccagcctatg
caccgctacgaaatgacggctctccagtacagccccatctcaaactctcagagctacatg
agcgcctcgccgtcaggttatggtggaatatcctacacgcaacaccaaaactccagcttg
gcttcatctggggccatcggcacgctgggctcgctggtgaaatcggagccgagcgtaagt
cctcccattacagctcactctcgagccccttgtcccggagacttgcgagagatgataagc
atgtatttaccgacggcggaggcaggggacccgtccgttcagagcagacttcacgctgta
ccgcagcactatcaaagttccacgacgagcgtaaacggaactgttcctctgacacacata
tga
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