Sinocyclocheilus rhinocerous: 107718641
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Entry
107718641 CDS
T04916
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107718641
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107718641
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
107718641
NCBI-ProteinID:
XP_016381299
LinkDB
All DBs
Position
Unknown
AA seq
1640 aa
AA seq
DB search
MDSSTLHSLFLLFTFFSYVIAGMDSCYDEVGVPSRCLPKFENAAFNRTVIVSNVCGIPPE
DYCMQTGSTRSCHFCDALDLELNHNATYLTDFHTDEEPTWWQSQSMFYGVQYPNSVNITL
HLGKAFEITYVRLKFYTSRPESFAIYKRTEENGPWQPYQYYSASCHKMYGRDNKGFIRPG
ENERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSPVLQDWVTATDILISLDRLN
TFGDEFFKDPKVLRSYFYAVSDFSVGGRCKCNGHASDCFTNEEERMVCACEHNTAGVDCQ
HCAPFYQDRPWARATADSANQCVRCNCSGLADECVFDAEQYCSTGSGGRCVGCRENTAGP
HCERCRENFFRSLPQRTCQNCNCNAVGSVSLQCDAEGVCMCWPGVSGVKCDICKSGFHSL
GPGGCRLCECDNRGSAGVCSAEDGRCPCKTNVEGQSCNRCKPGSFNLQLENPDGCKKCFC
FGHSLACSSSSQYMAINITSDFLEDPDGWKGVFTRGHEQSLIWKEGEVYLLPYREENGFY
KAPDKYLGNRLLSYGRILSLSFTAELEELLPRSVTVMLEGSGISVTADLYSQQETYSSLE
KTPINTFTLRLTEKSINPSIAPFEFLRMIYNLTALHISNAGGQNYTSQLSRVSLESSVRT
NYNIVPYASWVEECTCPKGFTGQFCEHCAPGFTRETPDGGPFSPCVPCNCNQHESCHPET
GVCDCRDFTTGRYCELCEDGYYGNALTGSPGVCLPCPCPDHTTCAQVPKMGDVVCTNCPT
GLRGVRCELCEDGFYGNPLGWGGKVQPCVRCECNGNVDPNAVGVCDHMTGRCLKCLGHTT
GDHCEKCRSGYYGNALANELNPERKCKPCACNVAGTSGSPNDCHPDTGKCVCLSHVTGRD
CGQCETGYFNLQPGLGCEMCNCNPIGSSSSACHPITGQCMCRTGVEGLSCDTCRMGFFGF
SSRGCRACNCDLMGSTLMQCHDNGTCSCRHGFVGYKCDKCELNYYQNRLTHQCEECPLCY
SLIRDQASKLKARLQELEMLLSSYDCNRYSRHYRGRQQHRHQHNGLDNHIQKDQVEDYLP
NALEDLIAIQEAREAFIKQFSQLETSAQTIQLQLRSIASALNCNLTDSGEVTEEENTLKG
ENECQELGDTLSAALKMQDQLQKMTLDLNGMVIPSVIPKEPNKWNAIVNESEVLVKSHTD
VAAHIEQIAEDAFKMANRTYSQLITLLEDNSTESYVQDLTEKLEEMQQLKENLMLEVNET
LVTHMSLQRHNSEIAAVLENITSSLSELRRTDGNFTLTAQESNITSFSQMHNQTNVTATQ
DPEITEIEDLMNRTAELDISVQSKEHLINKTREEIEPHVDSAEKHLKTFQEIKQLTAVAE
GFKVSAVSSVVTGKEVEAEILSLQKGLEDMEQDWPQLPTYSKGYLKREKLLKEKTLVDVK
KRVKQTERIIKPAVENATAVSSTAKQAQESADAVAKDAKVSLTQGKRTKHASGQLRSAVD
TTLEQLTELESQASQKQKTMEAEDIQLSSRNVIDSMETAKSQLESFTNTLTLLLKQLDAN
VVLENYDRILNETAARLRVLQGAVESPSLTGKIQRLHSAAHDQEKQLQNLEQSLQEIREE
RDSLTDIAQNLPKTCPQKGH
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctacacttcactctttatttttgcttttcaccttcttctcctatgttatt
gctggaatggactcttgctacgatgaggtgggcgtcccaagccgctgtttgcctaaattt
gaaaatgcggccttcaatcgtacagtgatagtttcaaatgtgtgcggtattccgcccgag
gactattgcatgcagacggggtccacgcggtcatgccacttctgtgatgccttggacttg
gaactgaatcacaatgccacttacctgacagacttccacacggatgaagagcccacctgg
tggcagagccagtccatgttctatggagttcagtatcctaattcagtcaacatcacactg
catcttggcaaggcctttgagatcacatatgtccgtttgaagttctacaccagccgaccg
gagagcttcgccatctacaagcgtaccgaggagaatggaccatggcaaccgtaccaatat
tacagcgcttcctgtcacaagatgtatgggagggacaataagggcttcatacgtccaggc
gagaatgaaaggacggcactctgcacagatgaatttagtgacatctcacctctaactggc
ggaaatgtggccttctccacattggagggacgacccagtgcctacaacttcgaccagagt
cctgtgttacaggactgggtgacagctactgatatcctcatctctctggacagactgaac
acttttggagatgagttcttcaaagatcccaaagtgcttcgttcatatttttatgccgta
tctgatttctccgtggggggcaggtgcaagtgtaatggccatgccagtgactgcttcacc
aatgaggaggaacgtatggtgtgtgcttgtgagcacaacactgcaggggttgactgtcag
cactgtgcccctttctaccaggaccggccatgggcacgggccactgccgattcagccaac
cagtgtgtgaggtgtaactgcagtggtcttgctgatgaatgtgtgtttgatgcagagcag
tattgcagcacaggaagtggggggcgctgtgttggctgcagggaaaacacagctggccct
cactgtgagagatgcagagagaacttctttagatccttaccgcagcggacctgccaaaac
tgtaactgtaatgcagtgggctctgtgagtttacagtgtgatgcagagggagtgtgtatg
tgctggccaggtgtgtctggtgtgaagtgtgacatctgcaagtccggtttccactctctc
ggccctggtggatgcaggttgtgtgagtgtgacaacaggggcagtgcaggagtatgttca
gccgaagacggacgctgcccttgcaagactaatgtggagggtcagtcctgcaacaggtgt
aaaccaggctctttcaacctccaactggaaaacccagatggctgtaaaaaatgcttttgc
tttggacactccctcgcctgttcatcctccagtcagtacatggcaattaatattacttca
gacttcctagaagatccagatggctggaagggtgtgttcaccagagggcatgaacaatcc
ctcatctggaaggagggagaagtctatctgttgccctacagagaggagaatggcttctac
aaagcacctgataaatatctggggaacaggttgctaagttacggacggatccttagtctg
tcatttacggctgagctggaggaactcttgcccagaagtgtgaccgtgatgctggagggc
tccggaatatcagttactgctgatttgtactcacaacaggagacttattcctcattggag
aagacgcccatcaacactttcactctcaggttaacagagaagagcataaatccatctatt
gccccatttgagtttctccgaatgatttacaatctaactgcactacatatcagcaatgca
ggaggccagaactacacctcccagctctccagggtaagccttgaatcttcagtccggaca
aactacaatatagttccatatgcttcatgggtggaagagtgtacttgtcctaaaggattc
actgggcagttctgtgaacactgtgctcctggattcaccagggaaacccctgatggtgga
cccttctccccttgtgtaccttgcaactgcaatcaacatgagtcctgccatcctgagaca
ggtgtgtgtgactgcagagacttcaccacaggtcgttattgtgagctttgtgaagatggt
tactatggcaatgcactgactggcagcccaggcgtctgcttaccttgtccttgtccagat
cacaccacctgtgcccaggtgccaaagatgggggacgtggtttgtaccaactgtccaaca
ggcctaaggggtgtacggtgtgaattatgtgaagatggtttctatggcaaccctttgggt
tggggaggcaaagtgcaaccgtgtgtgaggtgcgagtgtaatgggaacgtggatcccaat
gcagtgggtgtgtgtgatcacatgactggacgctgtctgaaatgcctgggacatacgact
ggggaccattgtgaaaaatgcagatcaggttactacggcaacgctttggccaatgaactc
aatccagagcgaaagtgcaaaccttgtgcctgtaacgtggctgggacatcaggatcaccg
aatgactgccacccggatacaggaaaatgtgtttgcctgagtcatgtgacagggagagac
tgtggacagtgcgaaactggctatttcaatctgcagccaggcttgggctgcgagatgtgt
aactgcaaccccattggctcttcttcttcagcatgtcatccaatcacaggacagtgcatg
tgtcgaacaggtgtagaggggctgtcgtgtgacacttgtcgaatgggattctttggtttc
tcctctagaggctgcagagcatgtaattgtgacctcatgggctcgaccttgatgcagtgc
catgacaatgggacgtgttcttgtcgccatgggtttgttggatataagtgtgacaagtgt
gaattgaactactaccagaaccgcctgacccaccaatgtgaggagtgtcctctgtgctac
agtctcatcagagaccaggccagtaaactgaaggccagactgcaggagttggagatgctg
ctcagcagctatgactgcaatagatacagtcggcattatcgtgggcgccagcagcacaga
caccaacataacggcctggacaatcacattcagaaggaccaagttgaagactatctgccc
aatgctctggaggacctcatagctattcaagaggctcgcgaggccttcattaagcagttc
tcacagctggaaacatctgcccagaccatacagctgcagctgcgtagcattgcatcggca
ctgaactgcaacttaacagacagcggagaagttacagaggaagaaaatactctgaagggt
gaaaatgagtgtcaagagcttggtgacacattatccgctgctctgaaaatgcaagaccag
cttcagaagatgactcttgaccttaacggcatggtcatcccatctgtaatccctaaagaa
ccaaacaaatggaacgccatagtgaatgagtctgaggtgctagtgaaaagtcacacagac
gtggcagctcatatagagcagatagctgaagatgcctttaaaatggctaacagaacctat
tcacagctgataactttactagaagacaactccacagagtcatatgtacaggatctcaca
gagaagctggaggagatgcagcagttgaaggagaatctgatgcttgaggttaatgagact
ttagtgacacacatgtcacttcagaggcacaactccgagatagctgctgttttagagaac
atcacctcttcactatctgaactacgcagaacggatggcaatttcaccctcacagcgcag
gagtccaatataacgtctttctcacagatgcataatcaaacaaatgtcacagcaacccag
gatcctgaaatcacagagatcgaggacctgatgaacaggacagctgagttggacatttct
gtccagtccaaagagcatttgataaataagaccagagaggaaatagagcctcacgtggac
agtgctgaaaaacacctgaaaacttttcaagagatcaagcagctgacggctgtggctgag
ggatttaaggtgtccgccgtctcctctgtggtgacagggaaagaggttgaggcggagatc
ctatctttacagaagggtctggaagacatggagcaggactggcctcaactgcccacatat
agcaaaggatatctgaagagagagaagttgctgaaagaaaagaccctggtggatgtgaaa
aaaagagtcaagcagacagagagaattatcaagcctgcagtggagaacgctacggctgtg
agcagcacagctaaacaagcccaggagtctgcagatgcagtggctaaagatgccaaagtg
tccctcacgcaggggaaacggacaaaacatgcatctggacagttgcgttcagctgtggac
accaccctggagcagttgactgagctggaaagccaagcttcacagaaacagaaaaccatg
gaggcagaggacatccagctttcttcaaggaatgtgatagacagcatggagacagccaag
agtcagctggagtcctttacaaacacgctaactctgctccttaaacaactggatgctaat
gtggtgctggagaactatgatcgcatcctgaatgagactgcagcccgtcttcgtgttctc
cagggtgctgtggagagtccatctctcaccggaaagattcagaggctccacagtgctgcg
cacgatcaagagaaacagctgcaaaatcttgaacagagcctgcaggagatacgagaagaa
agagacagtctgacagacatcgcccagaacttgcctaaaacatgcccacaaaaagggcac
taa
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