Sinocyclocheilus rhinocerous: 107718816
Help
Entry
107718816 CDS
T04916
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04120
Ubiquitin mediated proteolysis
srx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107718816
04120 Ubiquitin mediated proteolysis
107718816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107718816
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107718816
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
U-box type E3
107718816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
107718816
NCBI-ProteinID:
XP_016381532
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLTSPQRETPPGPLPGPSGASSQPVPPAPSHTL
GLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASC
EKSMSQVDVDSGIENMEVDDSDRREKRNLAEKDSSSSSDVSEEQALHLICKILRVSWKEQ
DRDVIFLPSLAAEFQKNPRDVYSDFRDLIGQILMEALMMSTRSRDCNPFASLTATSQPIT
AARSPNCHLTLVPHSSQSGSPMMPCAGSFGASSLSSLGASGGGMAGDSGSDRFTIESCKE
TEMLNYLIERFDCVGMEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGTLTQPRTPL
QPSLLVPYMLCRNLPYGFIQELVRMTHQEEDVFKQIFVPILQGLTLAVKECSFDSDNFKF
PLMALAELCEIKFGKTHPVCNLITSLPLWCPDPLSPGTGREIQSLSFLGAFFSLSVFAED
DTKVGDKFFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAA
LVNRNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDALYIFHPKCRLNVSTE
ETRLNATMEDLKSWLTELHEDSSKFSEPKFPTECFFLTLHAHHLSILPCCRMQQKCKLVR
SKACADAGLLDENLLRRCLQFFSMVIQLILRMVEPAYPGVTLPLNPEIPKSFAALPEFYI
EDVAEFLLFIVQYFPQVLYEPCTEDIVNFLVVFICSQNYIKNPYLIAKLVEVLFVTNPAV
QPRTQRFFEMMENHPLSINQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQ
NINHQGTFLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEMQEEMKNKEQWDQLP
REQQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNL
QQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEE
VISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYNDAPDEFKDPLMDTLMTDPV
QLPSGNIMDRAIILRHLLNSPTDPFNRQPLTESMLEPVPELKARIQAWMREKQSGRV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgtagaaggcgactggcccggttagctggaggg
cagacgtcacagcccagcacccctttgacatctccacagagagagactcccccaggaccc
ttgccagggccctccggggcctcatcacagcctgtcccaccagctccatctcacactctg
ggcttaaatgcccaaaatgtcacccctgccacctctcctatgggggcctcgggggttgct
taccgcagccagagcagcgagggggtcagctctctctccagctctccatctaacagtctg
gagacacagtcccaatccctgtcccgctcacagagcatggacattgacacagcctcctgc
gagaagagcatgtcccaagtagatgtggactcaggaattgagaatatggaggtggatgac
agtgatcgcagagagaaaaggaacctggctgaaaaggattcctcatccagttctgacgtc
tctgaagagcaggctttgcaccttatctgtaagatcttgcgtgtttcctggaaggagcag
gaccgtgatgtcatctttctcccctcacttgctgctgaattccagaagaatcctagggat
gtttactctgacttcagagacctgattggacagattttaatggaggctctcatgatgtcc
acccgttcgcgtgactgtaacccattcgccagcttgaccgccacatctcagccaattacc
gctgccagatcaccgaactgtcacctgactctcgtcccacactccagccagagcggcagt
cccatgatgccctgcgctggttcattcggtgccagctctctttccagcctgggtgcatcc
ggaggggggatggctggtgactcaggtagtgaccgctttaccatagagtcctgtaaagag
acggagatgctcaactacctcatcgagcgttttgactgtgtgggaatggaagagaggaag
gccccaaagatgtgcagccagccagctgtcagtcagctgcttagcaacattcgttcccag
tgcatttcccatgctgcactagtgcttcaaggtaccctcacacagcccaggacccctcta
cagccctccctactggttccctacatgctgtgccggaaccttccgtatggcttcatccag
gagttggtgcgcatgactcatcaggaggaggatgtgtttaaacagatcttcgttcccatt
cttcaagggctcactttagctgtaaaagaatgttcttttgacagtgacaacttcaagttc
cctctgatggctttggctgagctttgtgaaatcaagtttgggaagactcaccctgtatgc
aatttgatcacctctctgccattgtggtgtcctgaccctctcagtcccgggacaggaaga
gaaattcaaagcctctcctttctcggagcattcttcagtctttctgtgtttgctgaggat
gacactaaagtgggagacaagttcttctccggccctgccatcactatggagaacacccgt
gtggtcagccagtcactgcagcattatctggagtccgcgaggggagatctgtttaaaatc
ctgcacaacatcttgttgaacggagagacaagggaagcagctctgagctacatggcagct
ctggtgaatcgtaatgtgaagaaggctcaaatgcagaccgatgataagctggtgtccaca
gacggcttcatgctgaacttcctgtgggtgctgcagcaactcagtatgaagatcaagctg
gaaacagtggatgctctctacatcttccaccctaagtgtcggctgaatgtcagcacggaa
gagacccggctcaatgccacgatggaggacctgaagagctggctcactgagctgcatgaa
gactcgtccaagttctcagagcccaagttccctacagagtgcttcttcttaacgctacac
gcacatcatctgtccatcctcccatgctgtcgcatgcaacagaagtgcaaactggtgcgc
tctaaagcctgcgcagacgcagggctgctggatgagaacctgctgcgcagatgtctgcag
ttcttcagtatggtcatccagctcatcttgcgtatggtggaacctgcctacccaggcgta
accctgcctctgaacccagaaatccccaaaagttttgcagcactgccagagttttacatt
gaagatgtggccgagttcttgctttttattgtgcagtactttccacaggttctctatgag
ccgtgcactgaagacattgtgaactttctggtggtcttcatttgcagtcagaattacata
aagaacccatacttgatcgccaagctggtggaggtgctgtttgtcaccaatcctgcagtg
cagccgcgtactcagcgattctttgagatgatggagaaccacccactgtctatcaatcag
cttgtgccagctctcatgaagttttacaccgatgtggagcacactggagccacaagcgag
ttctatgacaagttcaccatccgttaccacatcagcaccatattcaaaagcctatggcaa
aacattaaccaccaaggcaccttcctggaggagttcaactctggtaaacagtttgtacgc
tacatcaacatgctaattaacgatacaacttttctgctggacgagagtttggagtctctg
aaacgcatccatgagatgcaggaggagatgaagaataaagagcaatgggaccagctgccc
agggagcagcagcagagccgacagtcccagctgactcaggatgagagagtatcacgatcg
tacctggctttagccacagagacagtggatatgttccatatcctcaccaaacaggtccag
aagcccttcctcaggcctgaactgggtcctcgtctggctgccatgttgaattataacctg
cagcagctatgtgggcctaaatgtcgagacttgaaggtggaaaacccagaaaaatatggt
tttgagccaaagaagctcctggatcaactcactgacatttatctgcagctggactgtgca
cggtttgctaaagccattgcagatgaccagcggtcatacagcagggagctgtttgaggag
gtcatttcaaaaatgaggaaagcgggcataaaatccaccattgctattgagaaattcaaa
cttctgttggaaaaggtagaggagatagtagcccgcaattctcagtctgagatggattac
aacgatgccccagatgagtttaaagacccgctgatggacactctcatgactgatcccgtg
caacttccttctggcaacatcatggatcgagccatcattctgcgacacctcctgaactct
cccactgaccccttcaacagacagcctctcaccgagagcatgctggaaccagtcccagag
ctgaaggcgcgtatccaggcctggatgagagagaagcagagtggccgtgtttga
DBGET
integrated database retrieval system
