Sinocyclocheilus rhinocerous: 107719897
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Entry
107719897 CDS
T04916
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107719897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107719897
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Pre-60S particles
RNases
107719897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
107719897
NCBI-ProteinID:
XP_016382926
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MVLDGLTQSHFYRYFSLFRHLRDKYSARWTLAPSSGDLLTSDLLSAEVAVCDRAAETRAA
LPAALRWHPVIRRFGLNAAGLSNFLLTQQEMIKQKYPVKGGWGCEEFVCTVSDGHVTDSS
PLFGLDCEMCLTCVGLEVTRVALVDSSGRCVLDELVKPPNPIIDYCTRFSGITRAILAPV
STRLADVQSRLLQLLPPDAVLVGHSLDGDLRALYLVHPHVIDTSLLYRQEFGRRFKLKHL
AQVILKREIQSEVRIGHDPCEDALAALHLAQYFIRKGPREVVEDHLEDLWDLEFPEDDDS
DHAISSNRRSSPLRFGHALSRSGQSAVFLGGSVEMSGSLSNQQCRRLQCSSDREVVCVYR
RVVQSYTLSVLQFSSFRNTLNQTAAMGPHLKQVCERLRQMCVLYVGPLPSDATETLVHRL
LKRCGRLRTIRLLHYTHEVHAEVVFEHLEGAQLALEHLNGLQINDCIIKARRPVHELCLD
LNERLSERQNDPLNAHVIYVSNLSSKPHRHEDQLQSFRQFGPIQRVTSAAEHAGKHSRHA
FIRFECADSTQAAVGVAPQIGNRKLSVCHALTPPHMTSWTRPVTTETSPDTPEQGEECDE
RLLERQMKKLDARVGKVFRALEENCLSVVILPGHRSDGVDHPGLCFIHIKQSN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggtcctggatggactcacacagagtcacttctacagatacttcagtctcttcagacac
ctgagagacaaatacagcgcaagatggactctggcgccctcttctggtgacctgctgacc
tctgacctcctcagcgctgaggtcgcggtgtgtgacagagcagcagagacgcgtgcggca
ctaccagctgcgctgaggtggcatcccgtgattcgccgcttcggtctgaacgccgcgggg
ctgagcaacttcctgctgactcaacaagaaatgatcaaacagaagtatcctgtcaagggt
gggtggggctgcgaggagttcgtgtgtacagtgagcgacgggcatgtgacggacagcagt
cctctgttcggtctggactgtgagatgtgtctgacgtgtgtggggttagaggtcacgcgt
gtggcgctggtggacagcagtggacgctgtgtgctggacgagctcgtcaaaccacccaac
cccatcatcgactactgcaccaggttctcaggaatcacgcgagcgatccttgcgcccgtc
tccacgcgtctggcagacgttcagtccagactgctgcagctgctgccaccggacgctgtg
ctggtcggtcactctctggacggagacctgcgcgccttatatctggttcatcctcacgtc
atcgacacgtctctgctgtaccggcaggagttcggccgcaggttcaaactcaaacacctg
gctcaggtcattctgaagcgggagatccagtcggaggtcaggataggtcacgacccctgt
gaggacgcgctggccgctcttcatctggctcagtacttcatcaggaagggacccagagag
gtggttgaggatcatctggaggatctgtgggatctggagtttcctgaggacgatgactct
gatcacgcgatctcgtccaatcgtcgcagcagccctctccgcttcggccacgctctcagc
agatccggccaatcagcagtgttcctgggcggatcggtagagatgagcggctcgctgtcc
aatcagcagtgcaggagactccagtgctccagtgacagagaggtggtgtgtgtgtacaga
cgggtggttcagtcctacacactcagtgttcttcagttctcgtcattcagaaacacactg
aatcaaacagcagcgatgggaccacacctgaagcaggtgtgtgagcgtctcagacagatg
tgtgtgctgtatgtcggcccgctgccgtctgatgccacagagactctcgtacacagactc
ctgaagcgctgcggacgcctgcggaccatacgactgctgcactacacacacgaggttcat
gcggaggtagtgtttgagcatcttgaaggagctcagctcgctctagaacatctgaatgga
ctccagatcaacgactgcatcatcaaggcgcggcgtcccgtacacgagttgtgtctggat
ctgaacgagcgtctctctgagcgtcagaacgatcctctcaacgctcacgtcatctacgtg
agtaatctgtcctccaaaccgcatcgccatgaagaccagctccagagcttcagacagttc
ggccctattcagcgcgtcacgagtgccgcagagcatgctgggaaacacagcagacacgcc
ttcatcaggttcgagtgcgctgacagcactcaggccgcggtgggcgtcgccccccagatc
ggaaacaggaagctgtcagtgtgtcacgctctgactccgccccacatgacctcatggaca
cgccccgttaccacggaaaccagcccagacacgccagagcagggggaggagtgcgacgag
cgactgctggagcggcagatgaagaaactggatgcaagagtgggaaaagtgttcagagcg
ctggaggagaactgcctgagcgtcgtgatcctgcccggacacagaagcgacggcgtcgat
catcccggcctctgcttcattcacatcaaacagagcaactga
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