KEGG   Sinocyclocheilus rhinocerous: 107719942
Entry
107719942         CDS       T04916                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03013  Nucleocytoplasmic transport
srx04141  Protein processing in endoplasmic reticulum
srx04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107719942
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107719942
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    107719942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107719942
   04131 Membrane trafficking [BR:srx04131]
    107719942
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107719942
Membrane trafficking [BR:srx04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    107719942
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107719942
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    107719942
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR55 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40
Other DBs
NCBI-GeneID: 107719942
NCBI-ProteinID: XP_016382982
UniProt: A0A673HJ68
LinkDB
Position
Unknown
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGSWDKMYEYTGHDSSVNSVCWGPYDFGLFL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWMCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVTSITDSQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttcagtcattaacacagtggacacctcgcatgaggatatgatccatgatgctcag
atggactattacggcaccagactggccacctgctcctctgatcgctctgtgaagatcttt
gacgtcaaaaacggagggcagatcctcgtggctgatctgaggggtcatgagggtccggtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaggaggagaacggcagctgggacaagatgtatgaatacaca
ggccacgactcgtccgtgaactcagtttgctggggaccgtatgactttggcttgtttctg
gcctgtggcagctcagacggtgccatttcagtgttgacctgctctggagatggacactgg
gatattaagaagatcaacaatgcacatacaatcggctgtaatgctgtgagttgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaagaagaggacgggcag
tggaaagaggatcagaagctggaggcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctgcctaccagcacaatcgccagctgctcacaggatggtcgtgtgttt
atctggatgtgtgacgacccagccggtaacacctggacggccaaacttctacacaaattc
aatgacgttgtgtggcacgtgagctggtccatcacaggaaacatcctggctgtgtcagga
ggagacaacaaagtgaccctgtggaaggagtcagtggatggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgacctccatcacagacagccagcagaacgagcag
tga

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