Sinocyclocheilus rhinocerous: 107720033 Help Entry 107720033         CDS       T04916                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism srx  Sinocyclocheilus rhinocerous Pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04518   Integrin signaling srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107720033    04518 Integrin signaling     107720033  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     107720033   09142 Cell motility    04820 Cytoskeleton in muscle cells     107720033  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107720033 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107720033 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  107720033 NCBI-ProteinID:  XP_016383096 LinkDB All DBs Position Unknown AA seq 1451 aa AA seqDB search MFSFVDIRLGLLLAAAVLVVRGQGEDDMSFGSCTLDGQNYNDKDVWKPEPCQICVCDSGT VMCDEVICEDTSDCANPEIPDGECCPICLDDTDIVTERPLPPVNGPVGPVGPSGDPGPPG TPGRDGIPGENGLPGPPGPPGNPGFGGGSFLSQMAYGSEKSSGPALPGPPGPMGARGPPG SAGSPGPQGFTGPAGESGEPGAPGPMGSRGSAGPPGKNGEDGEAGKAGRPGERGAAGPQG ARGFPGTPGLPGIKGHRGFSGLDGAKGDTGPAGPKGEPGVHGESGVAGAMGARGLPGERG RSGPPGPAGARGNDGNTGAAGPPGPTGPAGSPGFSGGAGAKGETGPSGGRGSEGPQGARG EPGNPGPAGAAGPAGAPGSDGGAGGKGSPGAAGIAGAPGFPGSRGPAGPPGPSGGPGPKG NNGDPGLQGSKGDAGPKGEAGPFGPQGLAGPSGEEGKRGARGEPGGAGPVGPPGGRGAPG NRGLPGSDGAPGPGGGPGERGANGPMGSQGASGESGRPGEPGLPGSKGMTGAPGSPGPDG KAGPSGSSGQDGRPGPPGPAGSRGAPGVMGFPGPKGADGEAGKLGERGVVGPPGALGAPG KDGDFGAPGAPGPAGPSGEKGEQGPAGSPGFQGLPGAQGATGESGKPGDQGAHGEGGPSG PSGPRGDRGFPGERGSNGPAGPTGARGAPGSPGNDGSKGEPGAAGAPGGVGPNGMQGMPG ERGAGGMPGTRGDRGDAGPKGPDGALGKDGLRGMTGPIGSSGPSGAPGEKGEPGAVGPPG VTGSRGSPGERGELGPPGPAGFAGPPGANGQPGAKGQSGDSGPKGDAGSPGAAGPVGGAG PQGPAGATGSKGARGGAGSPGATGFPGAAGRVGPPGPSGAAGPSGPTGVAGKEGQRGARG ERGTTGRPGEAGASGPPGPSGEKGSLGPDGPAGPSGSPGPPGVIGSRGIVGLSGQRGERG FSGLPGPSGEPGKQGPSGPLGERGPPGPMGPPGLGGAPGEAGREGNPGHDGAPGRDGPPG PKGDRGESGNSGPHGAPGAPGAPGPMGPSGKTGDRGEAGPAGSAGAAGPAGARGGQGPAG SRGDKGEAGEAGERGMKGHRGFTGMAGVPGPPGSPGDQGPAGPSGPAGPRGSSGSNGMAG KEGMNGLPGPVGPPGPRGRSGEMGAAGSPGLPGPPGPPGPAGIGEPFLPMPQGEKGPDPM RGGYRADDASVRDRDTEVDTSLKSLSQKIENMRSPEGTQANPARMCRDLRMSHPDWKSSS YWVDPNQGSPLDAIKVFCNMETGETCVSPSQNTIPMKNWYTSKNIREKKHVWFGESMPNG FQFQYGSEGSDPDDVNIQLTFMRLMSNEASQNITYHCKNSIAYMDQTTGNLKKAVLLQGS NDIEIRAEGNSRFTYRVSEDGCTSHTGTWGKTVIDYKTTKTSRLPIIDIAPMDIGAPDQE FGVEVGPVCFL NT seq 4356 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatatccggttagggctgctgctcgccgcggcggtcctcgtggtg agaggacaaggagaggatgatatgtcattcggtagctgtacattggacggtcagaattac aacgacaaggatgtgtggaagcctgagccctgccagatctgcgtgtgcgacagcgggacg gtcatgtgcgacgaggtgatctgcgaggacacatcagactgtgctaatcctgagattcct gacggagaatgctgccccatctgcctcgacgatacagacattgtgactgaacgtcctttg cctccagttaatggtcctgtgggtcctgtgggtccatctggagatccaggtcctccaggg actcctggcagagacggtattcctggagagaacggactcccgggaccccctggtcctcct ggaaaccctggcttcggcggcggatctttcctttcccagatggcttacggcagtgagaaa tccagcggccccgcactccccggacccccaggccccatgggtgctcgtggcccccctgga tctgcaggttcacctggccctcagggattcactggacccgcaggcgagtctggagagcct ggtgctcctggcccgatgggttctcggggttctgctggtcctcctggaaagaatggagaa gatggtgaagctggcaaagccggccgtcctggagagcgcggagccgccgggccccagggt gctcgtggattcccaggaacccctggacttcccggcatcaagggacacagaggtttctct ggtctagatggagctaagggagacactggacctgctggacctaagggagagcctggagtt catggtgagagcggtgttgctggagccatgggtgctcgtggtttgcccggtgagagaggt cggtctggtcctcccggccctgctggtgcacgcggtaatgatggaaacactggcgccgct ggacctcccggacccactggccctgctggttctcctgggttctctggtggtgctggtgct aagggagaaaccggcccttctggaggtcgtggttcagagggaccccaaggggcccgtgga gagccgggtaaccctggacctgctggcgctgctggtcctgctggagctcctggttctgat ggtggtgctggtggcaaaggatctcctggtgctgctggtattgctggcgctcctggtttc ccaggatcccgtggacctgctggaccccctggcccttctggtggtcctggccccaaggga aacaatggtgatccaggactccaaggctctaagggagatgccggtcctaagggagaagct ggcccatttggaccccagggtctggctggaccttctggtgaagaaggaaagcgaggagct cgtggagagccaggcggcgctggacctgtcggaccccccggaggccgtggtgcccctggc aatcgtggtcttcctggaagtgatggagctcctggacccggggggggccctggagagcga ggagccaacggaccgatgggatctcaaggagcctccggagagtctggtcgcccaggagag ccaggattgcctggatccaagggaatgactggtgcccctggaagccctggacctgatggc aaagctggaccctctggttcatctggacaagacggccgacctggaccccctggacctgct ggatctcgtggtgctcctggagtgatgggcttccctggtccaaagggagctgatggtgag gctggaaagcttggtgagagaggagttgttggacctcctggtgctttgggcgctcctggc aaggatggagattttggtgctcctggtgctcctggacctgctggcccatctggagagaaa ggagagcagggacctgccggttctcctggattccagggtctgccaggtgcacagggtgcc accggagagtcgggcaaacctggtgatcagggtgctcatggtgaaggcggtccttctggt ccttctggtccaagaggtgacagaggtttccctggagagcgtggaagtaatggacctgct ggccccaccggtgctcgaggggcccctggttctcctggtaatgatggttctaagggagag cccggagccgctggggcccctggtggtgtggggcccaatggaatgcagggaatgcctgga gagcgcggtgccggaggcatgcctggaaccagaggagacagaggtgatgctggacccaag ggccctgatggagctcttggtaaggatggcctgcgtggaatgaccggccctattggatct tctggaccttctggtgctcctggtgagaagggagagcctggtgctgttggacctccagga gtgactggttctcgtggatcccctggagagcgcggagagctcggtcctcctggacctgct ggttttgctggacctcctggtgccaacggacagcctggtgctaagggacagagcggtgac tctggacccaagggtgatgctgggtctcctggagccgctggccccgtcggaggcgctggc ccacagggacctgctggtgctactggatctaagggtgctcgtggtggtgctggatctcct ggtgctactggtttccctggtgctgccggtcgagtcggacctccaggtccttctggtgct gctggaccctcaggcccaaccggtgttgctggtaaagaaggacagagaggagcccgaggt gagcgaggcaccacaggtcgccctggagaggccggggcctctggacccccaggaccctcc ggagagaagggtagccttggccccgatggccctgctggcccctctggttctcctggaccc cctggtgttattggatctcgtggtattgtcggtctttctggacaaagaggagagagagga ttcagcggtctccccggaccttctggagagccaggcaagcagggacccagtgggccttta ggagagcgagggcctcctggacccatggggcctcctggactgggtggagctcctggtgaa gctggtcgtgagggtaaccctggacatgatggtgctcctggccgtgacggtccccctgga cctaagggagaccgcggtgagtctggcaactccggccctcatggggcccctggtgctcct ggagctcctggccccatgggtccatcgggcaagactggagatcgtggagaggctggtccc gctggttctgctggtgctgccggtcctgctggtgctcgtggtggtcaaggtccagctggt tctcgaggagataagggtgaggctggagaggctggagagcgaggcatgaagggacaccgt ggcttcactggaatggctggagttcctggacctcctggatcccctggtgaccaaggaccc gctggaccatctggccctgctggacctcgtggatcttctggctctaacggcatggctggt aaggagggtatgaatggtttgcccggacctgttggacctcctggaccccgaggtcgctct ggagaaatgggagctgctggttctcctggtcttcccggacccccagggcctcctggcccc gcaggcatcggcgagccgttcctccccatgcctcagggagagaagggtccagatcctatg cgtggaggctacagagccgacgacgccagcgttcgcgaccgcgacaccgaggtggacacc agcctaaaatctctgagccagaagatcgagaacatgcgcagccccgagggaacccaggcc aaccctgcacgcatgtgccgcgacctgaggatgagccatccagactggaagagcagttcc tactgggtggatcccaaccagggctctcctctggatgccatcaaagtcttctgcaacatg gagactggtgagacctgcgtcagtccatctcagaacaccattcccatgaagaactggtac actagcaagaacatccgagagaagaagcacgtttggtttggagagtccatgcccaatggc ttccagttccagtatggcagcgagggctctgatccagacgatgttaacatccagctgacc ttcatgcgtctgatgtccaacgaggcttctcagaacatcacctaccactgcaagaacagc atcgcctacatggaccagaccacaggcaacctgaagaaggctgtgctgctgcagggctcc aacgacatcgagatcagagccgagggcaacagccgcttcacatacagagtcagcgaggac ggctgcacgtcacacactggcacatggggcaagacagtcattgactataagacaacgaaa acatctcgtctgccaatcattgatatcgctcctatggacattggtgctcccgatcaggaa ttcggcgtagaagttggcccggtctgcttcttgtaa

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