Sinocyclocheilus rhinocerous: 107720051
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Entry
107720051 CDS
T04916
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03440
Homologous recombination
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107720051
03460 Fanconi anemia pathway
107720051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107720051
03400 DNA repair and recombination proteins [BR:
srx03400
]
107720051
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
107720051
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Topoisomerases
107720051
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107720051
FA (Fanconi anemia) pathway
107720051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
107720051
NCBI-ProteinID:
XP_016383127
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MNVLFRSLRVIGSRFYRQISVNMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRREGY
SVYNKIYEYEYNLFGQNVAVCMTSVSGHLLSLEFKAPFQKWHSCNPVLLFDAEVEKYCPE
NFIPIKRTLEREVRQCQALVIWTDCDREGENIGFEIIDVCKAVKPNIQVFRARFSEITPN
SIRRACETLTEPDINISDAVDVRQELDLRIGASFTRFQTLRLQKIFPESLSDQLISYGSC
QFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFSWKRHRLFSHTACLVLYQMC
MEDPMAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQGFISYP
RTETNMFPQNLNLTMLVEQQTQDNEWGNFAQRILESGGPTPRNGNKSDKAHPPIHPTKYT
NSLQGNEKRLYEFIVRHFLACCSKDAQGQEVTVEIEIAEERFSASGLTIIARNYLEVYPY
DKWYNKVIPLYTADTMFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEHIE
TIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDKA
SVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEITEQEQGEMEIPLPVRKCPQCNR
DMVLKKKKDGTGMFLSCMGYPACKAAVWFPDTVLEVSRDESVCPTCRPHPVHMLKFKFKR
GSLPPMMPLEFVGCIGGCDETLREVLNLKYIRRGEAESGSRTHTSSGSNQHHVPRTTSAP
PSRVENVRPPAPRANGSRPPASLPPPRAAQPPASAQGGAIVCNCGQDAILLTVRKEGPNQ
GRQFYKCNTGDCKFFLWADQPAEQAPPGGSRGPLGQNSQPPRPSTGFGNVPQQRQNNRGE
GGDDGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVAPATDFSG
GNGARHPGNKKASTTSNKPPTAKRPRTCGICHEPGHTRVTCPQGT
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttgtttagatcactaagagtgattggcagtcgattttataggcaaatatct
gtaaacatgataaggcgcactcagattaagaaagtgctttgtgttgctgagaaaaacgat
gcagctaagggcatagcagagatcatgtcaaatgggaggtcgagaagaagagaaggctac
tctgtttacaacaaaatatatgagtacgaatacaacctgtttggtcaaaatgtagctgta
tgcatgacatctgtatcaggacatctcttgagtcttgaattcaaagctccttttcagaaa
tggcatagttgtaatccagtcctgttgtttgatgctgaggtggagaagtactgccctgag
aactttataccgatcaaaaggactttggagagagaggtgagacagtgtcaagctctggtc
atttggactgattgtgacagagaaggagaaaatatcggctttgagatcattgatgtttgc
aaagcagtgaagccaaacattcaggtcttccgtgcacggttctctgagatcaccccaaac
tccataaggagagcctgtgagacccttactgagccggatatcaacatcagtgatgcggtg
gatgtgagacaggagctggatctccgcatcggcgcatcatttaccaggttccagacatta
cgcttgcagaagatattcccagaatctctctcagatcagctcatcagttatggcagttgt
cagttcccgacccttggctttgtggtagaacggtttaaagccattcaagccttcgtccct
gaaactttctttaaaatcaaagttgtccatgagcctaatgaagaggaatcggttgaattc
agctggaaaagacatcgtcttttcagtcacacagcatgccttgtgttgtatcagatgtgc
atggaggatcccatggcaaaagttatatctgtaacaagtaaaccaaaaagcaaatggcga
cctttaccccttgacactgtggaacttgaaaaactggcttcaagaaaactgaggataagt
gccaaagaaaccatgaaaatcgcagaaaagctgtacactcaagggtttatcagttatcct
cgaactgagaccaacatgtttccacaaaacctgaacctaaccatgctggttgagcaacag
acacaagacaacgaatggggaaattttgctcagcgcattttggaaagcggtgggcccaca
cctcgaaatggaaacaaatcagataaggcccatccccccattcaccccaccaaatacacc
aacagtttacagggaaatgaaaagcggctgtatgagttcattgtacgtcacttcctggcc
tgttgttccaaagatgctcagggtcaagaggtgacggtcgagattgaaatagctgaagag
agattctctgctagtggattgacgatcattgctcgcaattatttggaagtgtacccttat
gacaagtggtacaataaggttattccattatatacggctgacaccatgttccagcccaca
gcgattgagatggtggaaggacagaccagtccaccacagcttctgacagaggccgacttg
atatcgctaatggagaaacatggcattggtactgatgcaacacatgctgaacacattgag
accataaagagtcgcatgtatgtggggttgacggctgaccagaggttccttcctggagaa
cttggcatgggtctcgttgaagggtataactcaatggggtatgagatgtctaaaccagac
ctgagagcggagctggaggcggaccttaaacttgtgtcagagggcagaaaggacaaagct
tctgtcctcagttatcacgtggcaaaatacaaggctgtttttattgagtctgtgaggaag
gcaaaaaaattggatgaggctttgtcaaattatctcggccctgctcaggagattaccgaa
caggagcaaggagaaatggagataccattaccagtgcgaaagtgtcctcagtgtaaccgt
gacatggtgctgaagaagaagaaagacggcacagggatgtttctttcatgtatgggatat
ccagcttgtaaagcagccgtgtggtttccagacacagttctggaggtcagcagagacgaa
agcgtctgtccaacttgccgtccacatccagtgcatatgctgaagtttaaattcaagagg
ggaagtttgccacctatgatgccccttgaatttgttggatgcatcggcggatgtgatgag
actctcagagaggtcttaaacttgaaatatatccgaagaggagaagcagaatctggctct
cggacacataccagctctggatcaaatcagcatcatgtacctagaaccacctcagcacct
ccatccagggtggagaatgttagacctccagcacccagagccaacggcagccgcccccca
gccagtctgccacctccacgggcagcacaaccaccagcttcagcccagggcggtgccatt
gtgtgtaactgtggtcaggatgccattcttctcactgttcgcaaagagggtcccaatcaa
ggccgtcagttctacaagtgcaacacaggagactgtaagttcttcctgtgggctgatcag
ccggctgagcaggcaccgcccggagggagcagaggacccctgggtcagaattctcaacct
cccaggccctcaactggctttgggaatgtacctcagcagaggcaaaacaacagaggagag
ggaggtgatgatggtgaaactatgtgtaactgtaatgagcctgcagtgaccaggaccgtc
atgaaagatggaccaaacaagggacgaatgttccacacctgtgggaaaccacgtgatcag
cagtgtgggttcttccagtgggcgaacgaaaatgtggctccagccacagatttctctgga
ggaaatggtgccagacatcctgggaacaaaaaggccagcactacctcaaacaagcctccc
actgccaaaaggccgagaacctgtggaatatgtcatgagccgggtcacacacgggtcacc
tgtccacagggaacatga
DBGET
integrated database retrieval system
