Sinocyclocheilus rhinocerous: 107720058
Help
Entry
107720058 CDS
T04916
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein-like isoform X1
Organism
srx
Sinocyclocheilus rhinocerous
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
107720058
NCBI-ProteinID:
XP_016383138
UniProt:
A0A673K8B1
LinkDB
All DBs
Position
Unknown
AA seq
2945 aa
AA seq
DB search
MMDGRDFGPPRSVHVPPPLLSGLPMESHRLGAAAAAGRMPPSPGHLGAGHPAALHTGKYL
SSAMNLHSHHSDAFPGASSPFLGGYVSSAHGSSDPAFRAPNPASLQMAQLWASYPHEGFP
HLPSSLYPSHYISLGHLEHPQISQHALFDSQKEGFYLPGSVHSQSAMARSPVAHMPGSFS
REKEALPPHKSSKDSNRDLGKEKPCKSNLGHSLPRKERERPKEESRPHSVVDLTLDVKAE
DERRVSNSERSAKTAEQAWPFSHQHSPALSTMDTKPKQSHQSLLGNCGTSSSTPTRHPST
EQDRRDRDRDEETSRPGGHLSSDKQRRCDSVATSAGTLHVSYASPSSLQPNPSHLPPRLV
SSGTYPPPHHMPPSMYPLYSTEKEPGKEHRVIAPTYVPSVEVYDERKGPIQIASQARDNK
NDKSRERDSHRSALQVGNERTHMDHGRSSVRSESPPHGDFKKDILREEGSIIRSNGLAMK
KPLHLEMCTNKSGNSPDARDLSNTTSKHMIKIGLETESRSQERDRVQRSAHPFSGMDPAT
RHSEQHPLKALGSAEPKWKPFEMGNYATSHIAALAAQHTHGPRGEEEGKRMYLDTTGLHR
PVSSGGSPKGHGEVSAMQSLIKYSGNFSSESGSRHGSDSCSPFGGLGSMKLEAGYPGVSR
VQHLPPQQSGKQLKKEPERPESAKSFGREGNSSQGEAEVRHPPVGIAVAVARQRDNSSKP
STVSDRDRPILGGAIKGPIHTEEEQGDARTHHGDERLLSGHVEREHEKVLRENKELADYT
QLHPPMVSASGLNPNLMVTGGPTLAGAGRWPADPASHLASHPWLPRPGAPSMWLSGSPYG
LGPPSLHQALPPGYPPALTGSIPPPYQFARDPQTGQVVVIPTEHLPHYAEMLERGPPLWS
AMYPPAGSSLQHAHQLQLLSHQQLLRQQELYMIQHQTAQVMELQRNAQLVERLNASQTRT
DLEGKPDKRGAEGAKSSLSGIPTSALHSRKPPPRSPTPSTSYSKALTPLPVPPLPSPVTA
LKSEERPKVEKSLPQQPYSHPSSPVPHSVSPALASPPPTSPIQTKEESVEVPEKEPLSLQ
KQPSTPFPSMYREIPPGYPYQSITAPFGSHYPYLLQPAAAADADGLAPDVPLPAETSEHL
ATATDVKPQHLCSPVVVEPLQPSRGPESMEEGGTVFKKEPNLEDSKEVLRLAPITTQDSS
TPTEAEAHPRHTATPSPEEESNEEDGEAVKIKAASSSHPGLYETSTPDSERTTRAETAEG
SMGLVDQVYKSSSNYSDTHHVVCDIQPAKPPSDLSDSLNPVDLRDPVPDAPHLESKLDNP
FLPNSSPPHLQPSSAPVAILPEDPMAGMFALVTASELPQAGAVSILADACGSRSELCAIV
SPLESTALEGMALLSQMAELEMQRQPIDDTQAVMLCGLESLLEAGRQVLLEAIECQPQVI
IRLPRELNPNKKYSWRQKKDEPMFSKSSLEGMDTVEVDYRVRLAELQQCYKEKQRELVKL
QRWRDKEEKHQQHQQQQQQQQQIQQQERNRSLARRGPGRPRKRKHGLCALSPPSSKLDSK
CAKLGRGVLYSEDSESGEVLRKRFRTSNRDEEEEEDSSALRLKKKKKSWSEQEASSSFSH
EAPKMAVKKSRVSEQEQLASKLDKALSLTELSKLSKPSCKFRDGSSGKSRASSGSRVPML
TDIDMRVKMGKSSLSKDLSIFHKFSKGGKSKMAAKTKPSHPCLKGKGQRRAPYSPVRSEI
SSYSNNTDSEEDNSLKDGWPPSSMLGRTGSRPQLPGLCSTPSKKKRSSSKRTSSSSSSSL
KSKQAAKERKHKHFALLLQEAGVSSSEDSFDQEYFTERDDYDDDDDEDEDGYDYELDESD
GLCSSSVEESGLGLLARFAASAIPSPVVTSPLSVVQLEAKQKAKKKEERQSLLGTAFEFT
DSECDVKTRKKFPSLLHGKRSAPELPLLPPASIMRDDSSPSKRGRKPKKPKSPREFSFDL
TADGSEDEQWTRRRSERIFLHDAAQANPISPSSKTPLPLTSKPARGPKASPQSPKELAKG
KEVKDPNKKKRIKETPLCLPPPQLSSTPSDSTRALPVSPGRKSKVKPKAREELGQNVLEF
PQQARGKGGAVSKLMESMAADEDFEPNQDSSFSEDENPAVSAQPERPCTPAPRNCVINKD
ELQDGLRVLIPMDDKLLYAGHVSTVHSPDIYSVVVEGERGNRPHIYCLEQLLQEAIIDVK
PPSVRYLPQGTRIAAYWSQQYRCLYPGTVVRGSPDMEDVDDLITVEFDDGDTGRIPLSHI
RLLPADYKIQCAEPSPALLVASTKRRGRKCSKDVPDGKETPPKNTVESTSKSRGRGRKPK
PKPEPEVAPKEHEKPDTPTPTQVLERPLSGQKSSPRPGRKIKQVGKASPSIPVSNESQKK
TTGIKPPTKVRSQPQSVYSPPLYGKVLSVDLYNEPSTSLASFISNNETASPAGKGKPVKR
LRKPEEEASGFGVKTQRKQPQTEILIKLDHEGVMSPKTKKTKALMMMEGQNLSKRENKSV
MGVSYTTISTADKTLKAKNKAVEADPPTTDSVSTYSVRKLCSGSEGLMKVSNSGEKDKKE
LECPNCSSSSSSSESDGEEERGASQEKKPKQDSTSSSSSRASSPTSSSSSTSSSSSSADS
HSSSSSSSSTTSDEESSCSSDEEPVAVSQPSPAAEHVPPQEEEDEKAKSKMGPAANIHKL
QKQQASGTQQQKPQRQQKVKQGVGRPKRREGIHLPTTKELAKRQRLPSVENRPKISAFLH
ARQLWKWFGKPTQRRGMKGKAKKLFYKAIMRGKEMIRIGDCAVFLSAGRPNLPFIGHIQS
MWESWGNNMVVRVKWFYHPEETNPGKKLHDKKNWDQMSGHSLPAVLQASSQRKDFMERAL
YQSSHIDENDVQTISHKCLVVSLEQYEQMVKTKKYQDSEDLYYLAGTYEPTTGMIFNTDG
VPVIC
NT seq
8838 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggccgagacttcggaccccccagatctgttcacgtaccgccgccccttctc
tcggggttgcccatggagtcacaccgactcggcgcggccgctgcggccggtagaatgcca
ccgtctcccggtcatctgggcgcggggcacccggcggctctgcacactggaaaatatctc
tcatcggccatgaacctacattctcaccacagtgatgccttcccaggggcctctagccca
ttcctcggcggatacgtcagcagtgctcatgggtcgtcggatccagcctttcgagcccca
aacccagccagcttgcaaatggcccagctctgggcttcttaccctcatgaaggttttcct
catttgccaagcagtttgtaccccagccattacatttccttgggccaccttgagcatcca
cagatcagccaacatgctctctttgactcccaaaaagaggggttttacctgccaggttca
gtgcactcccaatctgcaatggccaggagcccagtggctcacatgcccggctccttctcc
agggaaaaggaggccctgcctcctcacaaaagctctaaagactcgaacagggatctggga
aaagagaagccctgtaagagtaacctaggccactccctcccaaggaaggaacgagaaagg
ccaaaagaggagtcacggccgcacagtgtggtggacctcaccttggatgtcaaggcagaa
gatgaacgaagagtgagcaactcggagaggtctgcgaaaactgcagagcaagcttggcct
ttctctcaccagcactcgcctgctctgagcaccatggacactaaacccaaacaatctcac
cagagtttacttggcaactgcgggacaagcagcagcacgccaacccgacacccgagtaca
gaacaggacaggagggacagggaccgagatgaagaaaccagccgaccagggggccacctt
tcctccgacaagcagagaagatgcgattcggttgctacatcagctggcactctgcatgtg
tcatatgccagtccctcttctctgcagcccaacccatcccatctcccgcccagactggtg
tcctctggcacctaccctccccctcaccacatgccgcccagcatgtacccgctctactct
actgaaaaagagccaggcaaagaacacagagtgatagctcctacttatgtgccttctgtc
gaggtttacgatgagcgaaaagggccaattcaaattgcctcccaagctcgagataataaa
aatgacaagagcagggagagggactcgcacagatcagccctgcaggtgggaaatgagaga
acacatatggaccatggtcggtcctccgttaggagcgagtctccccctcatggggacttt
aagaaagacatattacgagaggaaggttcgataattaggtcgaatggtttggccatgaaa
aagcccttgcatttggaaatgtgcacaaataaatctggaaacagcccagatgccagggac
ttatccaacactacatcaaaacacatgatcaaaataggactcgagactgaatctcgcagc
caagagcgggacagggttcaaaggtctgcccatccgttttctggaatggatccagctacg
cgtcactcggaacaacatccattgaaggccttgggttctgctgaacccaaatggaagcct
ttcgagatgggcaattatgctaccagtcacattgccgcattggcagcccaacacacccat
ggcccccgaggtgaagaagagggcaagcgaatgtacctggacactactggcttacataga
ccggtaagcagtggcggaagtcccaaggggcacggggaggtttcggccatgcagagcctc
atcaaatacagtggcaacttctccagcgagtctggctccaggcacggatctgatagctgt
agtccttttggaggactgggcagcatgaaactggaggctggttatcccggagtgtctaga
gttcagcaccttccaccccagcagtctggaaagcagttgaagaaggaacctgagagacct
gagagtgctaagtcctttggcagagaaggaaactcttctcagggggaagcggaggttcgt
catccaccggtaggcattgcggtggctgttgcccgccagagggacaacagcagcaagccc
agcacggtatcggacagggacaggccaattcttggaggcgccatcaaaggcccaatccac
acagaggaagagcaaggagacgcgaggacgcatcacggcgacgagcgcctgctgtcggga
catgtggagcgtgagcatgagaaagtgttaagagagaataaggagttggcagactacacc
cagttgcatccacctatggtgtctgctagtggactgaaccccaacctgatggtaactggt
ggacccactctggctggtgcgggccgctggcctgctgaccccgcctcccacctggcctcc
cacccatggctgccccggccaggagccccctccatgtggctgtctggttctccatatggt
ctgggtcccccttcccttcatcaggcgctgcctccaggatatcctcctgccttgacaggc
tccatcccaccaccttaccagtttgcccgagatcctcaaaccgggcaggtggtcgttatt
ccgacagagcatctgccacactatgctgagatgttagagcgaggtcccccgctgtggtcg
gccatgtacccgccagcaggaagctctctgcagcatgcccatcagctccagctcctctcc
caccagcagcttctccgccaacaggagctctacatgatccagcatcaaaccgcacaggtc
atggagctgcaaaggaacgcacagttagtggagagattaaatgcaagtcaaacaaggaca
gatttggagggaaagccagacaagagaggagccgaaggggccaaatccagtctctcaggc
atccccacttcagccctgcactcacgcaagcctcccccacgctccccgaccccctccacc
tcatatagcaaagccctgacgccgctgcccgtcccaccgctgccttcacctgtcactgca
ctgaagtctgaggagagacccaaagtggagaagtccctccctcaacagccctactcccat
ccgtcgtctcctgtccctcactcagtcagccctgcattggcatcaccccctcctacctcc
cccatccagaccaaagaggaatctgtggaagtgcctgagaaagaaccactcagtctacag
aagcaaccttctactcccttcccatccatgtaccgtgaaattcctcccggctacccatac
caatcgataacagcacctttcggcagccattacccctacctcctccagccggctgctgct
gcagatgctgacggcctggctccagatgtgccgttgccggctgagacctccgagcacttg
gcaaccgccacagatgtcaaaccccagcacttgtgttctccagtggttgtcgagccactt
cagccatccagagggccagagtccatggaagagggcggcacagtgtttaaaaaagagcca
aacctggaagacagcaaagaggtcctgaggcttgcacccatcaccactcaagactctagc
acccccacagaggccgaggcacaccctagacacacagccacaccatcgccagaggaggaa
tcaaatgaggaagatggggaggctgtcaaaatcaaagctgcctcctcaagccatccaggg
ctgtacgaaacatctacgccggactctgagagaaccaccagagcagaaactgcagagggc
tcaatgggtctggtagaccaagtctacaaatcatcatctaattacagtgacacacaccat
gtagtttgtgacatccaaccagcaaaaccgccctcagatctctctgatagcctgaaccca
gtagacctcagagatcctgtcccggacgctccacatctggagtccaaacttgacaatcct
ttcctgcctaacagcagccctcctcaccttcagccctcttccgcaccggtggccatcctg
cctgaagaccccatggcaggcatgttcgccctggtcacagccagtgagcttccgcaggcc
ggagcagtgtccatcctggcagatgcatgtggctctaggtctgagctctgcgcgattgtc
agtcccctggagtccactgctctggaaggcatggccctgctcagccagatggcagagctg
gagatgcagaggcagcccatagatgacacacaagctgtaatgctctgtggactggagagt
ctgttggaagctggcaggcaggtcctcctggaggccattgagtgtcaacctcaggttatc
atccgcctcccccgagagctcaaccctaataagaaatacagctggagacaaaagaaagat
gaacctatgttctccaaatcctctctggagggaatggacaccgtggaagtggactaccgt
gtgagactcgctgaattacagcaatgctacaaagaaaagcaacgagagctggtcaaactg
cagagatggagagacaaagaagagaaacatcagcaacatcagcagcagcaacaacaacaa
caacagattcagcagcaggaaaggaacagaagtttagcccgcaggggcccgggacgtccc
cgaaaaaggaaacatggcctatgcgcactgtctccaccctcaagcaagctggattcgaag
tgtgcgaagttgggcagaggcgtgctttactcggaggactctgagagtggggaggtgctg
aggaagcgctttcggacctctaacagagatgaggaggaggaggaagatagcagtgcgttg
agattgaagaagaaaaaaaagagctggagtgagcaggaggcatcttcaagcttctctcat
gaggcacctaaaatggctgtgaagaagagccgagtgagcgagcaggagcagttggcatcc
aaactcgacaaggccttgtccctcactgagctcagtaaactcagcaagccctcttgtaag
ttcagagacggttcctcagggaagtccagggctagttctggaagcagagtccccatgctc
accgatatagacatgagagtcaagatgggaaaatccagcctatcgaaagatctcagtatc
tttcacaagttttccaaaggaggtaaaagcaaaatggctgccaaaacgaagccttcacat
ccatgccttaagggaaaaggccagcggagagcaccttattctccagtgaggtcagaaatc
agcagctactctaacaacacagattcagaagaggacaattccctgaaggatggctggcct
cctagctccatgttggggagaacagggtcacgtccacagctccccggcctgtgcagcact
ccatccaagaaaaagcgctcatcgtccaagagaacctcttcatcttcgtcttcatcactc
aagtccaagcaggcggccaaagagaggaaacataagcactttgctttattgctacaggag
gcaggagtcagctcctctgaggactcatttgatcaagaatattttaccgagcgggatgat
tatgatgatgacgacgacgaggatgaagatgggtatgattacgagcttgatgaaagcgac
ggcctgtgttcatcttccgtagaagagagcgggctgggtctcctggcccgtttcgccgcc
agcgctatcccgagccccgttgtcaccagtccgctctccgttgtccaactggaggctaaa
cagaaagccaagaagaaagaggaacggcagagccttctgggtacagcgttcgagtttaca
gattctgagtgcgatgttaagacgagaaagaagtttccgtcgcttttgcatggcaaacgg
tcggctcctgagctcccactcttgccgcccgcgagcatcatgcgtgacgactccagcccc
agcaagcgtggacgcaaacccaagaaacccaagtctccccgggagttcagtttcgacctt
actgctgacggcagcgaagacgaacaatggacacggcggaggagcgaacgcatcttcctc
cacgatgctgcccaagccaaccccatctccccgtccagcaaaactcctcttccacttact
tccaaacctgcccgtggccccaaagcatccccgcagagccctaaggagctggccaaaggc
aaggaagtgaaagaccccaacaagaagaagaggattaaggagacccccctgtgtctgccc
ccaccccagctctccagtacaccctcggacagcaccagagctctccctgtcagcccaggg
cgcaagagcaaggtgaagcccaaagccagggaggaattggggcaaaatgtgcttgaattc
ccccagcaggcacgagggaagggcggtgctgtcagcaaactgatggaaagtatggctgct
gatgaggattttgagcccaaccaggacagcagcttctccgaggatgagaatcccgctgtg
agtgctcagccagaaagaccctgcacccccgcccctcggaactgtgtcattaacaaagat
gaactgcaggatgggttacgggtcctcatccctatggatgacaaactcctgtatgccggc
cacgtcagcacggttcactctcctgacatatacagcgtggtggtggagggcgagaggggg
aacaggccacatatctactgcctggagcaactgctacaggaggcgattattgatgtgaaa
cccccctccgttagataccttccccaggggacccggattgcagcctactggagccagcag
taccgttgcctctaccctggcacggtcgtcagagggagcccagacatggaagacgtggac
gatttgattacagtggagtttgacgatggagacactggccgaatcccgctctctcatatt
aggctgctgccggcggactacaagattcagtgtgcagaaccatcccctgctctcctcgtg
gccagcaccaaaaggcgaggaaggaagtgcagtaaggatgtacctgatggcaaagagaca
ccacccaaaaacacagtggagtctacttcgaaaagcaggggcagaggaagaaaacccaaa
cccaagcccgagcctgaagtcgctccaaaggagcatgaaaagcctgacacaccaacccca
acgcaggtcctcgagaggcccctgtccggccagaaaagcagcccacggccaggtagaaaa
attaagcaagtcggcaaagccagcccctccatccctgtatctaatgaaagccagaagaaa
accacaggaatcaagcccccaaccaaagtccgttcccagccccagtctgtctactcgccg
ccgctctatggaaaagttctgtctgtggatctctataatgagccctccacttctctggcc
tcctttatttccaacaatgagactgcgagtcctgcggggaaaggaaagccggtcaaacgc
ttgagaaagcctgaggaggaggcatctgggtttggtgtgaagacgcaacgcaagcaacct
cagactgagatccttatcaaactggaccatgagggagtaatgtcacccaaaaccaagaag
accaaggccctcatgatgatggagggccaaaacctctccaaaagagagaataagtctgtc
atgggtgtcagctacactacgatatccactgctgacaaaacactgaaagctaaaaacaag
gcagttgaggcagacccgcctactaccgatagcgtgtccacctacagtgttcgtaagctt
tgcagtggcagcgagggtctgatgaaggtgagcaactcaggggagaaggacaagaaagaa
ctggagtgtcccaactgcagtagcagcagcagcagctcggagtccgacggagaagaggag
cgaggggcctcgcaggaaaagaagcccaaacaagactcgaccagctccagcagctcgcgg
gcatcaagtcccacctcttccagctcatccacaagcagttcctcatcctcagctgattcg
cactcctcctcctcatcatcatcctccaccaccagcgatgaagaatcctcctgtagctca
gatgaagaaccggttgctgtttctcaaccatccccagccgcagagcatgtaccacctcaa
gaggaggaagacgagaaggccaaatcaaaaatggggcctgctgccaacattcataagctc
cagaagcagcaggcatctggcacacagcagcagaagccccagagacagcagaaggtgaag
cagggtgtcggtcgccccaaaagacgagagggaatccacctcccaacaactaaggagctg
gcaaaaagacagaggcttccctctgtcgagaacaggcccaagatctctgctttcctccat
gccagacagctgtggaagtggtttggaaagcctactcagaggcggggaatgaaagggaag
gcaaagaagcttttctacaaagccataatgcgtgggaaggaaatgatccgtattggagac
tgtgctgtgttcctgtctgctggacgacccaacctccccttcattggacacatccagagc
atgtgggagtcctggggaaacaacatggtggtccgtgtcaaatggttctatcatcctgag
gaaaccaaccctggaaagaaacttcatgacaaaaagaactgggatcaaatgtctggccac
agtcttcctgctgttctgcaggcttccagccagagaaaagacttcatggagcgggccttg
taccagtcctctcacattgatgagaatgacgtccagaccatttctcataaatgtctggtg
gtcagccttgagcaatatgagcagatggttaaaactaagaagtaccaagacagtgaagac
ctctactacctggccggcacttatgaacccaccacgggaatgatattcaacacggatggg
gttcctgtaatctgctga
DBGET
integrated database retrieval system
