Sinocyclocheilus rhinocerous: 107720072
Help
Entry
107720072 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107720072
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107720072
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
U-box type E3
107720072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Siva
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107720072
NCBI-ProteinID:
XP_016383163
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLNITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
VALIPKNSSVIIRRIPIGGLKSTSKTYVIDRSEPSGSSKAIDDSSSISLALLSKTANLAE
TNASEEDKIKAMMSQSNHDYDPIHYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDRS
FEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGMYAIPTIDAEAYAIGKKEKPPFLPQ
NQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESDEHVCPTCKQ
SDVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAAQGAQTQTPAQRPPMRLATSRQQD
PLMAHVPSSAADSTPPQSTPAAPLSPVSTHQPSSTPPPSSSSTVNSSSAPAASNYSPVVN
SPQHSTKQDDPPSKYWIKICLMGSSVPTTSIPKGYHVPVIGKPNMPQHHMHRSGQPRASG
PRPTGSRPTWDPSSSRGRAPSERPPRTQPPPVQNLPPIVPPVYVPPALFPPPPPHPMPQP
PGGVPQQYPIQYPPGQQPPPPYNIPPPVFPPVPPNVTAPWVPPGPQPPIVNPISTMPTAP
FLSKEEFYRQQRRLKEDSQCRFVTREKSSKLEEFTNDFAKELLEYRKIQKERRRSYSRSK
SPYRDSSYSGSSYSYSKSRSRSRSPRSYSRSVSRSRSRSRSRSRSRSYSRSPYSRRGRGR
SRSYRSRSRTPTYHRSRSRSPSYRGREMSGMASGIYRSRSRSPLYKNHSPSKKLPPPSQI
EGERKYAGRYRELPPYDAKAYYGRNIDQSDPYERERYREWEREYREWYDKYLKSYDHPPG
SQMRRRAPGSRDSYTPEHFAPPRPRENSPYSRGRREDYPPPPQSHSVPPRSRAAMTYQEK
CAEKYGHLQVNTTGAGRGLNKESLKPLKDRESGGSTAADPKLQSVKHKKHRKKKREDGDL
FSNSDSMDESRKDDRKEDSMLMNSSRDDATPVRDEPMDSAAMSYKTTPVKEKKEKTKSKT
DKVKRKSDNSGQKKEESGKMSKPAREKESDAPRDKVAPTEPAIKRVKDEPSHKSEPSKPQ
SSESKLMLPRKLMQSRPIKHQELKPIKDEVKSKRELVKDPAKQDKGPVKDGKVPNKEPEK
PVKTEEKMPAKTVDTKQDKKKRKDGKPPAKDLDVPPVKVAKMEVDVAKNSPKPKTRLESE
RPVEKEKVAIPSLMDIKPEPVRKIKINREIGKRISSIDRPISAEDSAHATGKGRLDKSRG
KLRKVHAPDGSGSILVDYTSTSSTGGSPIKKHEDKLDLKKTVVKTLEEYTNDSSTPAEDE
IVMIQVPRSKWEKEDYESEDDDSKVTNRTGNINTSSSAPSEENTAVKSAGKESPHADKAL
PVSKEAEVKPAKDSTSGDKEKDTDKEKDRERERDKGKERDHSSTVDREVTDKRKPSVPNQ
ERERVQEKGSDHGSERSSSSQSSRDRQADRSEPTSRKPAGRETTTGVTSRKAEHRDDARD
HSGTRSKDERNPIRRRVSPSPPSRVKDLHTDSGRKTLEAPQESQSPSKNKRASSQNAPEP
KRTGPEDHKGDWPCNKESQGSRHSDVRPAKDREHRTPHTAFTPEPRTDAVKGGAHGDHIK
IPSARSTRLSSDLARETDEAAFVPDYSESDSETSDTESKMEQRGRERDSSGSQSPSPSGS
HGHSSSPSSPGSQDSKKKKKDKKEKKEKKKHKKHKKHKKHKKHTSNESESELKGQKHKHK
KKKSKKSKDKDKDDKEKDESERDEHKAKVTV
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaacttaactacgacacggtcaccttcgat
ggccttaatatcacgctcagtgatttgaaacgccagatcatggggcgagaaaagctgaag
gccgccgattgcgacctgcaaatcaccaacgctcagactaaagaagaatacactgatgat
gtagccctcatccccaaaaactcgtctgttatcatcagacgaatccctattggagggctg
aagtcgacaagcaaaacatatgtcatcgatcgatctgaaccaagtggatcttcaaaagca
attgatgattcttcatccatttcactggccctgctttcaaagacagccaatcttgctgaa
acaaatgcgtcagaggaagacaaaattaaagcaatgatgtctcagtccaaccatgactat
gacccaatccattatgcaaagaagcttgttggtccacctcccccaaactacacatgcttt
cgttgtggaaaaactggacattatatccgaaattgcccaacgaatgggcaggatcgaagt
tttgaagctcctcagcgaataaagaaaagcacaggaatccctcggagtttcatggttgag
gttgatgatccaaacagaaagggagtcatgttgaccaacagtggaatgtatgccattcct
actattgatgctgaggcctatgccattgggaagaaagagaagccaccatttttgccccaa
aatcagtcttcatcctcagaggaagaagatccagtacctgacgagctactttgtttgatc
tgcaaggatcttatgacagatgctgttgttatcccctgctgtggaaatagctactgtgat
gagtgtattcgaacgtgtttgctggagtctgatgaacatgtttgcccaacctgcaaacaa
tcagatgtatctcctgatgctttgattgcaaacaaattccttcgccaagcagtgaataat
tttaggaatgaaactggttataccaagaggattcgaaaagctgcagctgcacaaggagcc
caaacacagactcctgcccagcggccacctatgagactggcaacctcacgccagcaggac
cctctgatggcccatgttccgagctcagcagctgatagcacccctccccaaagcacacct
gctgcccctttatctcctgttagcactcatcagccctccagcaccccaccaccttctagc
agctccactgtaaacagcagcagtgcacctgcagcatcaaactatagccctgtggtgaac
tctcctcaacactctactaagcaggatgaccctccatctaagtactggattaaaatttgt
cttatgggatcatctgtcccgacaacttctattccaaagggataccatgtcccagtaatt
gggaagccgaatatgcctcagcaccacatgcacagatcagggcagccaagggctagtgga
ccaaggccgactggaagccgtcctacatgggatccgtcctcaagtagagggagagcccct
agtgagcgaccaccaagaacacagcctcctccagtacaaaaccttcctcctatagtaccg
ccagtgtatgtgcctcctgctctttttcctcctccaccaccacaccctatgcctcagcca
cctggtggtgttccacagcagtatcccatacagtatcctccaggacagcagcctccccct
ccctacaacattccaccacctgtatttccacctgtcccaccaaatgtgacggctccatgg
gtgcctcctggtccgcagccacctatagtcaaccctatctctactatgccaacagcacct
tttctatccaaggaggagttttaccgtcagcagcgtagactgaaggaagattcccaatgt
cgattcgttaccagggagaagtcgtctaaactagaggagtttaccaatgactttgccaaa
gagcttttggagtacagaaagatccagaaggagagaaggcgatcctactctagatcaaaa
tctccttacagggattcctcttacagtggctcatcatattcttattcaaaatcccgctct
cggtccagatcaccacgctcctactctcggtcagtatcccgatctcggtcaagatcacgc
tctcgttccagatcacgttcctactctcgctcaccatattcccgcaggggccgaggtcga
agccgtagctatcgatctaggtctcgcactccaacgtaccatcgctcccgcagtagatca
ccatcgtataggggtagagagatgagtggaatggcaagtggaatctatcgttctcgctcc
agatcccctctatataagaatcacagtcccagcaagaaactcccacccccttctcaaatc
gagggtgagcgcaaatatgcagggaggtacagagagctccctccttatgatgctaaggct
tattatggccgcaacatagaccagagtgacccctatgagagagagcgatatcgagagtgg
gaaagagagtacagggagtggtacgataaatacctcaagagctacgaccacccgccaggt
agtcaaatgcgaagacgtgctccaggcagcagggactcctatacccctgagcattttgct
cctccgcgaccaagagaaaattccccgtacagcaggggacgtcgggaggattatccgccg
ccacctcagagccacagtgtcccaccgagaagcagagctgcaatgacataccaagagaag
tgtgctgagaagtatggacaccttcaagtcaacaccactggagcagggagaggacttaac
aaagagtctttgaaacctctcaaggaccgagaatctggtggcagcactgctgcagacccc
aagctgcagtctgtgaagcataaaaagcatcgcaaaaagaagagagaagatggtgacctc
ttcagcaactctgactctatggatgaatccagaaaagacgatcgtaaagaggactctatg
ctgatgaattcaagtcgtgacgatgccacacctgtcagggatgagcccatggatagcgct
gcaatgtcctacaagactacccctgtaaaggaaaagaaagagaagactaaaagcaaaact
gacaaagttaaacgtaagtctgacaacagtgggcagaagaaggaagaatcaggaaagatg
tcaaaacctgctagagagaaagaatctgatgcaccacgagataaagtggctcccactgaa
ccagccattaagagagtcaaagacgaaccatcccacaaatctgaaccaagcaaacctcaa
tcctcagagtccaaactcatgctcccacgcaagttgatgcagtctaggcccatcaaacac
caggagctgaagcccatcaaagatgaggtcaaaagcaagagagaattggtgaaagaccct
gcaaagcaagacaaaggtcctgtcaaagatgggaaggtccctaataaagagccagagaag
cctgtgaaaactgaggagaagatgcccgctaagacagttgatactaaacaggataagaag
aaacgtaaagacggcaagccacctgcgaaagacctagatgttcctccagtaaaagtagca
aaaatggaagttgacgtggccaaaaactctccaaaacctaaaaccagactggagagcgaa
aggccagttgaaaaggagaaagtagctattccatctctgatggatattaagccagagcct
gtaagaaagattaaaatcaacagggaaattggcaagagaatatctagcattgatcggcca
atttcagctgaggactctgctcatgccacaggaaaaggcagactggataagtctagagga
aaattgaggaaggttcatgctcccgatgggtcagggtccatattggttgattacaccagc
accagttccacaggtggaagccccatcaaaaagcatgaggataagcttgacctaaagaag
actgtggtgaagaccctggaggaatataccaatgacagctccactcctgcggaggatgaa
attgtcatgatccaagtgccccgttccaagtgggaaaaggaagactatgaatctgaggat
gatgattctaaggttaccaacagaacaggcaacatcaacacatccagctctgctccttca
gaggagaacactgcagtgaaatcagctggcaaggagtctccacatgctgacaaagctctg
cctgtctccaaagaggcagaagtcaaacctgccaaggactccacatcaggtgataaggag
aaagatactgacaaagagaaagacagagaacgagaacgagacaaagggaaagaaagagac
cacagcagcactgtagatcgcgaggtaactgataaaaggaagcctagtgtacctaatcag
gaaagagagcgtgtacaagagaagggcagtgaccatggcagtgaacgaagctcttcttcc
cagtcctccagagataggcaagctgacaggtctgaaccaacctctagaaaaccagcagga
agggagacaactacaggtgtcaccagtaggaaagcagagcatagagatgatgcaagagac
cactcaggcacaagatcaaaagatgagagaaatccaatcaggaggagagtatcaccctcc
ccaccctcaagggtaaaagacttgcacacagactctggaagaaaaactcttgaagcacct
caggagtcccaaagtccaagtaagaataagagagcatcatcgcagaatgccccagagcca
aaacgaacagggccagaggaccacaaaggagactggccatgcaataaggagagccagggt
tctaggcattctgatgtacgtcccgcaaaggaccgggaacacaggactcctcatacagct
tttactccagagcctagaactgatgcagtgaaaggtggcgcacatggcgaccacatcaaa
atcccatctgcacgctccacaagactgtcctcagatttagcacgggaaacagacgaggct
gcatttgtccctgactacagcgaaagcgacagtgagacctcagacactgagagcaaaatg
gagcagagagggcgagagagggacagcagtggcagccagagtccaagcccatctggaagc
cacggacacagcagcagccccagctctccgggaagtcaggacagcaaaaagaagaaaaag
gacaaaaaggagaagaaggaaaagaagaaacacaagaagcacaaaaaacacaaaaagcat
aagaaacatactagtaatgagtctgaatcagagctcaaaggacagaaacacaaacataag
aaaaagaagtctaaaaagagcaaggacaaagacaaagatgacaaggaaaaagatgagagt
gagagagacgaacacaaggcaaaagtaactgtttaa
DBGET
integrated database retrieval system
