Sinocyclocheilus rhinocerous: 107720123
Help
Entry
107720123 CDS
T04916
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107720123
Glycosaminoglycan binding proteins [BR:
srx00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107720123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
107720123
NCBI-ProteinID:
XP_016383222
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MWKLIWTGILCCLGCIFAIDQLDISAGEVDWIPMLENPNKRSQRLFQMFVEKPGDHGLLP
RHKSNVFLSSRVQHCSQETVQQAVTNYLKYYQLRVCQEIVWEAFKIFLDRLPNQEEYKSW
MSQCQTERVSIQEIDSAFSQSEEHLALIHRRLAQTRLKSKTPTYSGCSPEESSQEQDRVP
PGDELPAETTVVVTTAVPDEVISESVKLVTAEAPSAVMIMEMDTEITNEIEQEAAASPSG
SLVEQRVELAMLLTGEPWSEELFNSTSSKHGRLTQKITEKISAALEELTEFKSVSVLNIR
PQMDPSSGDKAVLVEYVVSLQTSSEEISSETLGFINLQSNMVEGTFSYSEGPTVQYTIID
LHPDITESLHVETSPEETHPADESLDPDSKDDILAVEKPSEVPGEVVKEVFTVGDLLDST
MSEEEDLQDKDLVSQFPPNQTLAVEGEAVGPFIDAKQDIDLTMDDFDPASGSGAEDDWVT
VLTRAQEPVGETEGEEEVLIDVDTPQIEDYEFYTVTTVVEEDQILPEETPELITVKAGED
GNLQVGSNVPTMPPVKVAEAESTLKPEEDLILPEDNKEETVLTETQKDGETEVALITKEE
SDEEWEESVDSTTMAQQNDFVLTDVPAIQFSEDVLTEDEVLLVTTEPASPVYPTPLSPEK
EPPFSLNPLMTPAEVELVHTLNSEVMTKFLDVIHYKEEEGSGVPGVIQGGEVSSIALPTN
PGRSLIVFFSLRVTNMIFSEDLFNKSSAEYKALEQRFLELLVPYLQSNLSHFENLEILNF
RNGSIVVNSRMKFGKPVPRGVITAVYLIPEDFCNTAYQTMNLAIDKYSLDVESGMTRSVT
FVTLVLKPVYYVLCTSSHATLMLWLIYVGMFVLGEQADPCKFQACNEFAECTVNQWSGEA
ECVCNAGYFSMDGLPCQSICDLQHDFCLNDGKCDVIPGQGAICRCHVGENWWYRGEHCEE
YVSEPLIVGIAIASVAGFLLMASGVIFFLAGTLRDQYDKDETEDPVRREDSGPFLDRATK
YNPMFESDLTTGYSHYYQRYPGPLVHSSASAEASTEFSSEEIRHINENSELTKEDIQDRI
RILELYTRDRQFADFLKQHQIEMDNQRESSSSSQ
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctcatatggaccggcatcctgtgttgtttaggctgtatttttgcaatagac
cagctggatatttctgcaggggaagttgactggattcccatgcttgaaaatccaaataag
cgctcacaaagattgtttcaaatgtttgtggaaaagcctggagaccatggactcttgcca
aggcataagagtaatgtttttctgtccagtagagtacaacactgcagtcaagaaacagtg
cagcaagccgtcactaactacctcaaatactaccagctcagagtgtgtcaggaaatcgtg
tgggaggctttcaaaatcttcttggatcgcctccccaatcaagaagaatacaagagctgg
atgagccagtgccagacagaaagagtctccatacaggagattgactctgcctttagccaa
tcagaagaacacttagcacttatccacagaagacttgcgcagacgagactgaaaagtaag
acacctacatactcaggatgcagtcctgaggagtcttcccaagagcaagaccgtgtgcca
ccaggtgatgagcttccagcagagaccactgtggtggtgaccacggcggttccagatgaa
gttatctcagagagcgtgaaattagttactgcagaagcaccatctgctgtcatgataatg
gagatggatactgagatcactaatgagattgagcaggaagcagctgcttcgccttcaggt
tctctggttgagcagagggtggagttggctatgttattgactggagaaccatggagtgaa
gagctgttcaactccaccagcagtaaacatggccgactcactcagaagatcacagagaag
atttcagctgctttggaggagctgacagaattcaagagtgtgtcagtattgaacatcagg
ccacagatggatccctcaagtggtgataaggcagtattggtggaatatgttgtgtccctc
cagaccagcagtgaagagatcagcagtgagacactgggcttcattaatcttcaatccaac
atggtagagggcacctttagttactcagaggggcccactgttcagtacaccattattgac
ctccacccggacatcactgagtctctgcatgtggaaacctctccagaggaaacccatcct
gcagatgaatctctagaccctgacagcaaggatgatattttagcagtagaaaaaccatcc
gaggtgcctggagaggtagtgaaggaggtctttactgttggtgaccttttggattctaca
atgtcagaagaggaagaccttcaagacaaggacttggtgtcacagtttcctcccaaccag
actcttgctgtggaaggtgaagctgtaggtccctttattgacgccaagcaagacattgac
ttgacaatggatgactttgatcccgcttctggatctggtgcagaagacgattgggtaact
gttcttactagggctcaagagccagttggagagacagagggtgaggaagaggttttaatt
gatgtagacacaccacagatagaggactatgaattctacacagttacaacagtggttgaa
gaggaccagatcttgcctgaggaaactcctgaactgattactgttaaagctggagaagat
ggaaacctacaggttggtagcaatgtgcccacaatgccaccagtcaaagtggctgaggca
gaatctaccctaaaacctgaggaagacctcatactacctgaagacaacaaggaggaaact
gttttaacagaaacgcagaaggatggggaaactgaagttgctttgatcacaaaggaggaa
tcagacgaggaatgggaagaatctgttgacagtaccacaatggcacagcagaatgatttt
gtactaacagatgttccagctatacagttttcagaggacgttctaacagaggatgaggtc
ctattggtcaccactgaaccagcaagcccagtctacccaacacctctttcacctgagaaa
gaaccacccttctccctcaaccccttgatgaccccagcggaggttgagttggtgcatacc
ttaaattcagaagtcatgactaaatttttagatgtgatccattacaaagaggaagagggt
agtggcgtccctggtgtcatccagggcggtgaggtttccagcattgccttgccaactaac
cctgggcggtctttgatagtgtttttcagtcttcgtgtaactaacatgatattctctgag
gatctgttcaataagagctctgcagagtacaaagccttggagcagcggttccttgaactg
ctggtgccatatttgcaatcaaacctcagtcactttgagaacctggagatcttaaacttc
aggaatggaagcattgtggtgaacagccgtatgaagtttgggaagcctgttcctcgtgga
gtcattactgctgtttacctcattccagaggacttctgcaacacagcttaccagaccatg
aacctcgccattgacaaatattcattggatgtcgaatcaggaatgacaagatcagtcact
tttgttactttggtcctaaagcctgtatattatgtattatgtacctcatcacatgccacc
ttaatgctgtggctaatctatgtgggtatgtttgttttaggggaacaggcagacccgtgc
aagtttcaggcatgcaatgagtttgctgaatgtacagtgaaccaatggtcaggtgaagct
gaatgtgtgtgtaatgctggttacttcagcatggacggactaccctgccagagcatctgt
gaccttcaacatgacttctgcttgaatgatgggaaatgtgatgtcattccaggccaagga
gccatctgcagatgccatgttggggaaaactggtggtacagaggagaacattgtgaagag
tatgtttctgagccactcatagttggcattgccatagcatctgttgccgggttccttctg
atggcgtcaggagtaatcttcttcctagcaggaactctgagagaccagtatgacaaggat
gaaacggaggacccagtacggagagaagacagcggaccatttctagacagggccactaag
tataaccccatgtttgagagcgatttaactacaggttacagccattactaccagcggtac
cccgggcccctagtccacagcagtgccagtgccgaggcatccacagagttcagcagcgaa
gagatacggcatattaatgagaacagtgaactcaccaaggaggatattcaagatcgcatc
cgcattcttgaactctacacaagagatcgtcagtttgctgattttttgaagcagcatcaa
atagagatggataatcaaagagaaagttcctccagtagtcaatag
DBGET
integrated database retrieval system
