Sinocyclocheilus rhinocerous: 107720169
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Entry
107720169 CDS
T04916
Symbol
prdm1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107720169 (prdm1)
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107720169 (prdm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_15
STL11_N
Motif
Other DBs
NCBI-GeneID:
107720169
NCBI-ProteinID:
XP_016383288
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MCGWDQSVLAASHHSSAMLTTEGAPCAVDNEELKMDVEDVDMTKWTEEEFEEKCTYIVKD
HTWEGPLENTELTRAEASLPRNLAFKHPPDSKEVIGVVSREYIPKGTRFGPLVGESYTAE
NVPKDANRKYFWRIYSNGEFHHFVDGLDEEKSNWMRYVNPAHSQQEQNLAACQNGMNIYF
YTVKAIPADQELLVWYCPEFARRLNYPASGEIMMQKLKQSLIEATQQVTEVKHPVKREHS
VSEILKDVLQEPSRPHPTRPRCPNSPGRPLYPSAVYPLRPSLNEDFLKTTTVFGLPNRSH
RPCTVTPSPSAHSSPESSPESSPTPASLEPRDTLLSFSPALYSRGLNHYPGYSPTGSMPF
YPNPHYSRYLMPHYPVSSLSGPPTLGGIFPHMYPFYSSLVPPHVPFPHGMLPSEGSRQFL
LPPDSPVPRDILLPAATSAFSAATSLKDKPVYGHGHPYAPAGGSPTAGSAASTGRVPTRP
TSAILSTSRSEDKAINLSKMKQGSTGYKSLDYPLKKQNGKIKYECNVCTKTFGQLSNLKV
HLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRL
HSGEKPYQCKICPAKFTQFVHLKLHKRLHTRERPHQCPHCHHNYIHLSSLRLHLKGYCLA
GSPSPSCSLDELNHINEEIERFDISDNADRLEEMEGFDVESMVEKQIFGLLWQEMDFTAS
YHKGSTGGDLHTPPPALSTYRLNEHGSEASVIKVHCSSPIQLLPIKVKKETEEAMET
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccagagcgtcctggctgcttctcatcacagctcggccatgttgact
actgagggagcaccctgcgccgtggacaatgaggagctcaagatggatgtagaggatgta
gacatgacaaaatggacggaggaagagtttgaagagaaatgcacgtacatcgtaaaagac
cacacctgggagggtcctctagagaacacagaactcacccgggccgaggcgtccttaccc
agaaacctggccttcaaacacccaccagactctaaagaggttattggtgtagtcagcaga
gaatacatccccaaaggcacacggtttggcccccttgtgggagaaagttacactgcagaa
aatgtccccaaagatgcgaacaggaagtacttctggcggatatactcaaatggagagttc
catcattttgtggacggactggatgaggagaagagtaactggatgcgttatgtgaatcca
gctcattcccagcaggaacagaaccttgctgcctgccaaaacggcatgaacatctatttc
tacaccgtgaaggccattcctgcagaccaagagctactggtgtggtactgccctgagttt
gcccgccgtctcaactaccctgcctctggagagattatgatgcaaaaactcaagcagagc
ctgattgaagccacacagcaagtgactgaagtcaagcacccggtgaaaagagagcacagc
gtttcagagattttaaaagatgtactgcaagaacccagcagaccacatcccacccgtcct
cgctgccccaatagcccaggccgacctctttatccgagtgctgtctatccactccgccct
tccctaaatgaagactttctaaagacaaccacagtatttggcctcccgaaccgctcacac
aggccgtgtacagtgacacccagcccttcagcacacagcagtccggagagcagtccagaa
agcagtcccacaccagcatcccttgagccaagagacacccttctctccttctctccagca
ctctacagtcgtggcctaaaccactacccaggctactcaccaacaggctccatgccattc
taccctaacccgcactactcacgctacctcatgcctcactaccctgttagtagtttgagt
gggccacctactttgggcggtatatttccacacatgtaccccttttatagcagcttggta
cctcctcatgttcccttcccacatggcatgcttccgtccgagggtagtcgacaatttctg
cttccacctgactctccggttcccagggacatcctgctcccagcggccaccagtgccttt
tctgcagccacttctctgaaagacaaaccagtctatggtcatgggcacccttacgctccc
gctggtgggtctccaacagctggctctgcagcctctacaggacgtgttcctaccaggcct
acctcagcaatcctgagtaccagccgctcggaggacaaggcgatcaatctcagcaagatg
aaacaaggttccacaggctacaaaagtctagattacccacttaagaagcagaatgggaag
atcaaatatgagtgcaatgtctgcaccaagacttttggtcaactttctaatctcaaggtg
cacctgcgagtccatagtggtgaacgaccctttaagtgtcagacctgcaataaaggtttc
actcagctggcccacctgcagaaacactatttggtccacacaggagagaaaccccatgag
tgccaggtgtgtcacaagcgtttcagcagcactagcaacttgaagacccatttgcgactg
cactctggtgaaaagccttaccagtgcaagatctgcccagccaagtttacacagtttgtc
cacctcaagctgcacaaacggctgcacacacgagaacgtccacaccaatgcccgcattgc
caccacaactacatccacctcagcagcctgcggctccacctcaaaggctactgcctagca
ggctctccttctcccagctgcagcctggatgaactcaaccacatcaacgaggaaattgaa
cgctttgacatcagcgataatgcggacagactggaagaaatggaggggttcgacgtggag
agcatggtagagaaacagatctttggcctgctctggcaggagatggattttacggcgtct
tatcacaaaggtagcactggaggagacctgcacaccccaccacctgcattatctacatat
cgtctgaacgagcatggcagtgaggcctctgtcatcaaggttcattgcagcagccctatc
cagctcctacctatcaaggttaaaaaggagacagaggaggccatggaaacctag
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