Sinocyclocheilus rhinocerous: 107720315
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Entry
107720315 CDS
T04916
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
KO
K13111
WD40 repeat-containing protein SMU1
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107720315
Spliceosome [BR:
srx03041
]
Complex B
Other components
Complex B specific factors
107720315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
LisH_TPL
WD40_Gbeta
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
PROPPIN
WD_LRWD1
VPS8_N
LisH
RMC1_N
LisH_PAC1
LisH_WDR26
Beta-prop_IFT122_2nd
DUF7165
Motif
Other DBs
NCBI-GeneID:
107720315
NCBI-ProteinID:
XP_016383484
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETAVSLHTVDSIESFNNDINNGQWDIVL
LAIQYLKLPDKLLIDLYEQIVLELVELGELGAAQCLLKQTDPMIMLKHTQPERYSHLETL
LTNPFFDSQEAYPVGSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQDLLPPGMSLELFRGKGALKDMEEERFPTQLSRLIKFGPK
SHVECVRFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDEAVLCLAVSH
DSDMIATGAQDGKIQVWRILNGTCLNRIERAHSKAVTCVCFNKDSSQLLSASFDQIIRLH
GLKSGKMLKEFRGHTAHINDVIFSHGGQHVISASADGTVKVWSMKTMDCTHTIKTPDIPE
GTDITVNNIVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGITHHPHQNLIATYSEDGLLKLWKP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgaagtggaatcagcagacgtgattcgtctgatcatgcaatacctgaaggaa
aataatttgcatcgcactctggcgatgcttcaagaggagacagcagtctcgctccacaca
gtcgacagcatcgaaagcttcaacaatgatatcaacaacgggcaatgggatatagtgctg
ctagcaatccagtatctgaaacttcctgacaagctgctcattgacctgtacgaacagatt
gtgctggagttggttgagttgggtgagctgggagctgctcaatgtttactaaagcaaacc
gaccccatgatcatgctgaagcacactcaacctgagcgctactcacacctggagaccctt
ctcacaaatccattttttgactcacaagaagcatatccagtgggcagcagtaaagagaag
cgcaggctggctatcgctcaagcttttgcaggagaggtctgtttggtgccaccttctcgt
ctcatggctcttctgggccagggccgtatatgtgagggggctttatacaggttacaggaa
accaaagcactaaggcagtttggctcattagcaatgctgtcattgaagtggcagcagcac
caggatctcttacctccaggtatgtctttggaactgttccggggcaaaggtgcattgaag
gacatggaggaagagcgcttccctactcagctcagtcgcctcataaagtttgggccaaag
tcccacgtagagtgtgtgcgattctctcctgatggacagtacttgattactggttctgtt
gatggtttcattgaagtctggaacttcaccactggtaaaattcggaaggatctgaagtac
caagctcaggataatttcatgatgatggatgaggctgttctgtgtctggcagtaagtcac
gactctgacatgatcgccactggagctcaggatggaaagatacaggtttggaggattctg
aacgggacgtgtctgaatagaatagaacgagcccacagcaaagcagtcacctgtgtctgc
ttcaacaaggacagcagtcaactattaagtgcctcctttgaccagatcatcaggcttcat
ggtttgaaatcaggaaagatgctgaaggagtttagaggccatacagctcatataaatgac
gtcatcttctcacacggtggccagcatgtcatcagcgcgtcagcagatggcacagtaaag
gtctggagcatgaagacaatggattgcacccacacaataaaaacccctgacattcctgag
ggtacagacatcactgttaacaacattgtgcttgtcccaaagactcccgagcactttgta
gtgtgcaacaggaccaacacggttgttgttacaaacattcatggccaggtgatgaggagt
ttctgttcaggtgtaagagagggggctgactttgtttgctgcacgttgtctccacgtgga
gagtggatttattgtgtgggagaagactatgtgctgtactgcttcagcaccatcactggc
aagctagagagaacactcacggtacatgaaaaagatgtgatcggcataactcaccacccc
catcagaatctcatcgccacatacagcgaggatggcctactcaaactctggaagccttga
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