KEGG   Sinocyclocheilus rhinocerous: 107720356
Entry
107720356         CDS       T04916                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03013  Nucleocytoplasmic transport
srx04141  Protein processing in endoplasmic reticulum
srx04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107720356
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107720356
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    107720356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107720356
   04131 Membrane trafficking [BR:srx04131]
    107720356
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107720356
Membrane trafficking [BR:srx04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    107720356
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107720356
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    107720356
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40
Other DBs
NCBI-GeneID: 107720356
NCBI-ProteinID: XP_016383520
UniProt: A0A673G285
LinkDB
Position
Unknown
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGSWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWMCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDSQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttcggtcattaacacagtggacacctcacacgaggacatgatccatgatgctcag
atggattattacgggaccagactggccacctgctcctctgatcgctccgtgaagatcttt
gacgtcaaaaacggagggcagatcctcgtggctgatctcaggggtcatgagggtccggtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaggaggagaacggcagctgggacaagatgtatgaatacaca
ggccacgactcctccgtgaactctgtttgctggggaccgtatgacttcggcttgattctg
gcctgtggcagctcagacggtgccatttcagtgttgacctgctctggagatggacactgg
gatattaagaagatcaacaatgcacatacaatcggctgtaacgctgtgagttgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccaactacatcaag
agatttgtatctggaggctgtgacaatctggtcaagctgtggaaggaagaggacggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctgccgaccagcacaatcgccagctgctcacaggatggtcgtgtgttt
atctggatgtgtgacgacccagccggtaacacctggacggctaaactcctccacaaattc
aatgacgtggtgtggcacgtgagctggtccatcacaggaaacatcctggctgtgtcagga
ggagacaacaaagtgaccctgtggaaggagtccgtggacggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgagctccatcacagacagccagcagaacgagcag
tga

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