Sinocyclocheilus rhinocerous: 107720356
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Entry
107720356 CDS
T04916
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx04141
Protein processing in endoplasmic reticulum
srx04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107720356
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107720356
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
107720356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107720356
04131 Membrane trafficking [BR:
srx04131
]
107720356
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107720356
Membrane trafficking [BR:
srx04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107720356
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107720356
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
107720356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
107720356
NCBI-ProteinID:
XP_016383520
UniProt:
A0A673G285
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGSWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWMCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDSQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggtcattaacacagtggacacctcacacgaggacatgatccatgatgctcag
atggattattacgggaccagactggccacctgctcctctgatcgctccgtgaagatcttt
gacgtcaaaaacggagggcagatcctcgtggctgatctcaggggtcatgagggtccggtg
tggcaggtggcctgggctcaccccatgtacggcaacatcctggcatcctgctcctacgac
aggaaggtgatcatctggaaggaggagaacggcagctgggacaagatgtatgaatacaca
ggccacgactcctccgtgaactctgtttgctggggaccgtatgacttcggcttgattctg
gcctgtggcagctcagacggtgccatttcagtgttgacctgctctggagatggacactgg
gatattaagaagatcaacaatgcacatacaatcggctgtaacgctgtgagttgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccaactacatcaag
agatttgtatctggaggctgtgacaatctggtcaagctgtggaaggaagaggacggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggctgggct
ccttccattggtctgccgaccagcacaatcgccagctgctcacaggatggtcgtgtgttt
atctggatgtgtgacgacccagccggtaacacctggacggctaaactcctccacaaattc
aatgacgtggtgtggcacgtgagctggtccatcacaggaaacatcctggctgtgtcagga
ggagacaacaaagtgaccctgtggaaggagtccgtggacggacagtgggcttgtatcagt
gacgtcaacaaaggccagggggccgtgagctccatcacagacagccagcagaacgagcag
tga
DBGET
integrated database retrieval system