Sinocyclocheilus rhinocerous: 107720713
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Entry
107720713 CDS
T04916
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107720713
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107720713
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107720713
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107720713
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107720713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
107720713
NCBI-ProteinID:
XP_016384004
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MDLPVVLFLLWGLLLDLLSGAVGSILYRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVG
TPYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIE
VQDINDNTPQFPSPVLTLSVPENTHVGALFSIPLATDKDTERNGVADYTLTAGPEAVALF
GLQVAEDRGEKLPQLIVLGSLDRERKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNA
PQFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYMLHQAIDPVPKLLRIDRSSG
IIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTH
SDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYF
LQTTTPLDYERVRDYRGEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSSTLFEVEFAE
ENQPGEKVVDVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKER
YEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQ
DMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSS
YVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIA
GGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHTIALVHIYVNETIT
NVSYVEALVGHSLYTPLDMDIAGDPDYGLAAQKSNIVYGSLAGVAGVVTVIVVVVFIRHR
LQREAKSGYQAGKKETKDLYAPKQGPKSGKGRKGKKGKPPKSPKPLGEDEEVSLQKSLKF
NLDGVNDSPRIHLPLTYPPGSPDLGRHYRSNSPLPSIQLQAQSPSASQKHQAVQELPAAN
TFVGTGGDDNSTGSDQYSDYSYKTNQPKYSTKTLPHRRVTFSTANPMQDQQDSSQQSYYD
SGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPETDIRSLPDVAMTGNC
SQECSELGHSDSCWMPGQPSPVRKTHNPPKLSTFVPYQERGSLGRLANGSVRLGGEENRP
RFPPSHSAYSSSDHTPSDHAPLEEVPLSVTSEFPPTSPPSNHASKREIYLFRESLGDHFD
NDYLVCSRTIYLMDIIITIASPQYLYFFRTYCSTVPAQIPALGRACFVCRGLTMGISLIR
VSNECGAVGICEHSSPQRKHRSQKKIPVQTLQLFSESHFSLHLPHRDCLQHLSPNN
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggatctccctgtggtgttgtttctgctgtggggactgttactggacttgctgagtggt
gcggtgggtagcattctataccgtgtgcatgaggaacaacctccgagcacactgattggc
agtctggcggctgaccagggcctaccagacactggacacctgtacaaactggaggtgggc
actccctatctgcgggtggatggcaaaactggagatatctttaccactgagatccccata
gacagagagacattgaaggattgtcgtaataaaggcaagccctgctttctggagtttgag
gtgtccgtcacagacctcattcagaatcagagtccacggctgatagagggaaggatcgaa
gtgcaggatatcaatgataacacaccacagtttccctcacctgtccttaccctctcagtt
ccagagaacacccacgtgggggcgctcttctcaattccactggccactgacaaagatacg
gagagaaatggagtagctgactacaccctaacagcaggaccagaggctgtagcactcttt
ggtctgcaagttgcagaggaccgaggtgaaaaattacctcaactcattgtattgggaagc
cttgatcgagaacggaaagactcctacgatctcaccatcaaagctgtggatggaggcaat
ccacctcgctatagcagtgccttgctgagggtcgtcattgctgatgccaacgacaatgca
ccccaatttgaaaaatcctcctacgaagcagaggtcgcagagaacagcccaattggacac
tctgtgttacaggtgaaggctaatgattcagacttgggtcctaacggtgagattgaatac
atgttgcatcaggccattgatcctgtgccaaaacttctccggatagaccgctcatcaggc
atcatatatgtcaaaggcccattggatcgtgaggagatcaacaatttgaagttttacgtc
gttgcccgagacaaaggcccctcacccaaaagttctaaaacatatgtttctattgatgta
accgaccagaatgacaatgcaccagcagtggagattcgaggcattggtcttgtgacccat
agtgatggagtagcaaacatttcagaggatatgcctgtaggcactgcagtggcattggta
caggtttcagacaaggatgagggagagaatgccgtggtgacatgtgtggttgctggtgat
gttcctttccagcttcggccagccagtgattcatcagttgacaacaagaggaagtatttt
ctgcagaccacaacacctctggactatgaaagggttagggactaccggggggagatagtg
gcagtggattcaggcaatccggctctgtccagcactaactcgctaaaagtccaagtgact
gacacaaatgacaattcccccattttctcatcgactctgtttgaagtagagtttgctgag
gagaaccagccaggagaaaaggtggtagatgtagtcgcctcagatgcagacagtggcact
aatgcagagctggtctacagcattattgcggactcttcaacaaggggactttttgagatt
gaccctaactcaggtgaagtacgtgctcggagccctcttgatcgtgagcacaaggagcgc
tacgagttccgtgttactgcagcagataaaggggttcccagtcacaggggtactgccaca
gttgtaatcaaggtacttgatcggaatgacaacgatcccaagttcatgctgagtggatac
agcttctcagtcttggagaacatgccaccccttagccctgttggcatggtaacagtacag
gacatggacgagggggagaatgctcaagtgcaactttctgtggaacctgatgtaggcaaa
tttgtgatccagaatggtactggcactattctgtccagtatctcatttgacagagagaag
gagagcagttacacattccgcttgaaagctgtagatggaggggatccaccaagatcatcc
tatgttggcgtgaccatcaatgtcctcgatgagaatgataatgcacctgttgtcaccaaa
ccatcaaactcatccttcatacgtctatctcccatggctgctccagacagtgttgtggaa
gtggtcgaagcggaggacattgattccggttccaatgctgagctagtatacagcattgct
gggggaaatccacatgaccttttttacatctctccatctaatggcgagatcacattaacc
aaggaactaactcggaaacacagtggtctgcatcgactggtgataaaagtgagcgatagg
ggcaaaccttcccgtcacaccattgccttggtacacatttacgtaaatgaaaccattacc
aacgtaagttacgtggaggcacttgtggggcatagcttgtacaccccactggacatggac
attgcaggagacccagattatggtttggctgcccaaaaaagcaacattgtctatggcagt
ttagctggagtggcgggagtggtcactgtgattgttgtagtggtcttcatcaggcatcgc
cttcaaagagaagctaagagtggttatcaggctggcaagaaggagaccaaagatttgtat
gcccccaagcaagggccaaaaagtggcaaggggagaaagggtaaaaaaggtaaaccacca
aagtcacctaaacctcttggagaggatgaagaagtcagccttcaaaagagtctgaaattt
aaccttgatggggtcaacgacagccccaggatccatttgcctctgacatatccgcctgga
agccctgacctaggcaggcactaccgttccaattccccattgccctccatccagctccag
gcccagtccccatctgcctcccaaaagcatcaggctgtccaggagctcccagctgccaac
acctttgtgggaacaggcggtgatgacaactccaccggctcagaccagtactcggattac
agctacaagaccaatcaaccaaaatacagcacaaaaacgctcccgcatcgcagagtgacg
ttctcaacagccaatcccatgcaagatcagcaggactcctctcagcagagttactacgac
agtggtctggaggaatctgagacccccagcagcaagagctcttcaggaccacgtatcggc
cccctcgccctgcccgaggaccactacgaacggaccacccctgatggcagcatcggagag
atggaacacccagaaaccgatattcgctcactgcctgatgttgccatgacgggaaactgc
agtcaggagtgcagcgagctgggtcactcagattcctgttggatgcccggtcagccttcg
cccgtccgcaagacccacaacccccctaaactgtccacgtttgtgccttatcaagagagg
gggagcctgggacgcctggccaacgggagtgtgaggctgggaggagaggagaacaggcca
cgcttcccaccttcccatagtgcctactccagcagtgaccacacccccagtgaccacgcc
ccactggaggaggtgcctctgagcgtgacatcagagttcccgcctaccagccccccctcc
aatcacgcctcgaaaagagagatatacctattcagagaatctctgggggaccattttgac
aatgactatctagtgtgctcaaggaccatatatctgatggacattatcattactattgca
tcgcctcaatatctctactttttccgcacctactgcagcacagtacctgcccagatcccg
gcgcttgggcgagcgtgctttgtctgcagggggttgacgatgggcatttccttaattagg
gtgagtaatgagtgtggtgcagttggcatatgcgaacactccagcccccaaaggaagcac
agatcacagaaaaagatcccggtccaaacgcttcaattgtttagcgagtcgcatttttca
ctgcacttacctcatcgcgactgccttcagcacctctcgccgaataattaa
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integrated database retrieval system
