Sinocyclocheilus rhinocerous: 107721012
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Entry
107721012 CDS
T04916
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107721012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107721012
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
107721012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
107721012
NCBI-ProteinID:
XP_016384351
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MSVVPPNRSSTGWPRGVNQFGNKYISQPAKPLTLERPINLYPLTNYTFGTKEPLYEKDSS
VAARFQRMREEFEKIGMRRAVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVE
GLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRRFTYRFAIGRDAAAEKC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgtacctcctaatcgatcatctaccggttggcctcgtggagtaaatcagttc
ggcaataaatacattagccagccggctaaaccgctcaccctggagagaccaatcaatcta
tacccactaacaaattacacattcggcactaaggagccgctctatgagaaggacagctca
gtagccgcacgctttcagcggatgcgggaagaatttgagaaaatcgggatgcggcgggct
gtggaaggggttctgatcgttcatgagcacagactccctcacgtgctgctgctgcagctg
ggaaccaccttcttcaaacttcccgggggtgagttgaaccctggagaggatgaggtggag
gggttgaaacgactaatgactgagattttggggcgtcaggatggagtgaaacaggactgg
gtcattgatgactgtattgggaactggtggagaccaaactttgaaccaccgcagtaccct
tatattccagcacacatcactaagcctaaagaacataagaagctttttctagtacagctg
caagagaaagcgttgtttgctgtgccaaagaactacaagctggtggccgcccccttgttt
gagctttatgataatgctcctggatatggcccaattatatccagtcttccacagctactg
agcagaaggttcacttacagattcgctattggtagagatgctgctgccgaaaaatgttga
DBGET
integrated database retrieval system
